Protein–RNA interactions for Protein: Q6PCM1

Kdm3a, Lysine-specific demethylase 3A, mousemouse

Predictions only

Length 1,323 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm3aQ6PCM1 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Kdm3aQ6PCM1 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC23.93■■□□□ 1.42
Kdm3aQ6PCM1 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Kdm3aQ6PCM1 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Kdm3aQ6PCM1 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Kdm3aQ6PCM1 Gm10129-202ENSMUST00000193100 1316 ntBASIC23.93■■□□□ 1.42
Kdm3aQ6PCM1 Cdkn3-203ENSMUST00000227149 1952 ntBASIC23.92■■□□□ 1.42
Kdm3aQ6PCM1 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC23.92■■□□□ 1.42
Kdm3aQ6PCM1 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC23.92■■□□□ 1.42
Kdm3aQ6PCM1 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Kdm3aQ6PCM1 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Kdm3aQ6PCM1 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Kdm3aQ6PCM1 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Kdm3aQ6PCM1 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Kdm3aQ6PCM1 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC23.92■■□□□ 1.42
Kdm3aQ6PCM1 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Kdm3aQ6PCM1 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Kdm3aQ6PCM1 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Kdm3aQ6PCM1 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
Kdm3aQ6PCM1 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
Kdm3aQ6PCM1 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Kdm3aQ6PCM1 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Kdm3aQ6PCM1 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Kdm3aQ6PCM1 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Kdm3aQ6PCM1 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Kdm3aQ6PCM1 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Kdm3aQ6PCM1 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Kdm3aQ6PCM1 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Kdm3aQ6PCM1 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Kdm3aQ6PCM1 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC23.89■■□□□ 1.42
Kdm3aQ6PCM1 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC23.89■■□□□ 1.42
Kdm3aQ6PCM1 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Kdm3aQ6PCM1 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Kdm3aQ6PCM1 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
Kdm3aQ6PCM1 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Kdm3aQ6PCM1 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Kdm3aQ6PCM1 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC23.89■■□□□ 1.41
Kdm3aQ6PCM1 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Kdm3aQ6PCM1 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
Kdm3aQ6PCM1 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Kdm3aQ6PCM1 AC099934.2-201ENSMUST00000196389 70 ntBASIC23.88■■□□□ 1.41
Kdm3aQ6PCM1 AC156953.1-201ENSMUST00000196953 70 ntBASIC23.88■■□□□ 1.41
Kdm3aQ6PCM1 AC157822.2-201ENSMUST00000200291 70 ntBASIC23.88■■□□□ 1.41
Kdm3aQ6PCM1 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Kdm3aQ6PCM1 AA386476-201ENSMUST00000098781 1665 ntBASIC23.88■■□□□ 1.41
Kdm3aQ6PCM1 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC23.88■■□□□ 1.41
Kdm3aQ6PCM1 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Kdm3aQ6PCM1 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Kdm3aQ6PCM1 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
Kdm3aQ6PCM1 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC23.87■■□□□ 1.41
Kdm3aQ6PCM1 Gm14281-201ENSMUST00000121700 1294 ntBASIC23.87■■□□□ 1.41
Kdm3aQ6PCM1 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Kdm3aQ6PCM1 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Kdm3aQ6PCM1 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC23.87■■□□□ 1.41
Kdm3aQ6PCM1 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Kdm3aQ6PCM1 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Kdm3aQ6PCM1 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Kdm3aQ6PCM1 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Kdm3aQ6PCM1 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Kdm3aQ6PCM1 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC23.85■■□□□ 1.41
Kdm3aQ6PCM1 AC154266.1-201ENSMUST00000223190 503 ntBASIC23.85■■□□□ 1.41
Kdm3aQ6PCM1 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC23.85■■□□□ 1.41
Kdm3aQ6PCM1 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Kdm3aQ6PCM1 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Kdm3aQ6PCM1 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Kdm3aQ6PCM1 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Kdm3aQ6PCM1 Gm42911-201ENSMUST00000199360 1630 ntBASIC23.84■■□□□ 1.41
Kdm3aQ6PCM1 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
Kdm3aQ6PCM1 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Kdm3aQ6PCM1 Gm43909-201ENSMUST00000203443 1876 ntBASIC23.84■■□□□ 1.41
Kdm3aQ6PCM1 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC23.84■■□□□ 1.41
Kdm3aQ6PCM1 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Kdm3aQ6PCM1 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC23.83■■□□□ 1.41
Kdm3aQ6PCM1 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Kdm3aQ6PCM1 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Kdm3aQ6PCM1 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Kdm3aQ6PCM1 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC23.83■■□□□ 1.4
Kdm3aQ6PCM1 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Kdm3aQ6PCM1 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Kdm3aQ6PCM1 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Kdm3aQ6PCM1 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Kdm3aQ6PCM1 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Kdm3aQ6PCM1 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Kdm3aQ6PCM1 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Kdm3aQ6PCM1 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Kdm3aQ6PCM1 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Kdm3aQ6PCM1 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Kdm3aQ6PCM1 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Kdm3aQ6PCM1 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Kdm3aQ6PCM1 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Kdm3aQ6PCM1 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Kdm3aQ6PCM1 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Kdm3aQ6PCM1 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Kdm3aQ6PCM1 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Kdm3aQ6PCM1 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC23.81■■□□□ 1.4
Kdm3aQ6PCM1 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC23.81■■□□□ 1.4
Kdm3aQ6PCM1 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Kdm3aQ6PCM1 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC23.81■■□□□ 1.4
Kdm3aQ6PCM1 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Kdm3aQ6PCM1 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms