Protein–RNA interactions for Protein: P62962

Pfn1, Profilin-1, mousemouse

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfn1P62962 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pfn1P62962 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pfn1P62962 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pfn1P62962 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pfn1P62962 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
Pfn1P62962 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pfn1P62962 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pfn1P62962 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pfn1P62962 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Pfn1P62962 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pfn1P62962 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
Pfn1P62962 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Pfn1P62962 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pfn1P62962 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pfn1P62962 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pfn1P62962 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pfn1P62962 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Pfn1P62962 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pfn1P62962 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pfn1P62962 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pfn1P62962 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pfn1P62962 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pfn1P62962 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pfn1P62962 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC15.27■□□□□ 0.03
Pfn1P62962 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pfn1P62962 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pfn1P62962 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pfn1P62962 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pfn1P62962 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pfn1P62962 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pfn1P62962 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pfn1P62962 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
Pfn1P62962 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pfn1P62962 Gm5953-201ENSMUST00000220644 2616 ntBASIC15.26■□□□□ 0.03
Pfn1P62962 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pfn1P62962 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pfn1P62962 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Pfn1P62962 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pfn1P62962 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Pfn1P62962 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pfn1P62962 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
Pfn1P62962 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pfn1P62962 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pfn1P62962 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pfn1P62962 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pfn1P62962 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pfn1P62962 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pfn1P62962 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC15.24■□□□□ 0.03
Pfn1P62962 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pfn1P62962 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pfn1P62962 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC15.24■□□□□ 0.03
Pfn1P62962 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pfn1P62962 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pfn1P62962 Gm14523-201ENSMUST00000117260 558 ntBASIC15.24■□□□□ 0.03
Pfn1P62962 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC15.24■□□□□ 0.03
Pfn1P62962 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pfn1P62962 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pfn1P62962 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pfn1P62962 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Pfn1P62962 Gm6627-201ENSMUST00000218299 2386 ntBASIC15.24■□□□□ 0.03
Pfn1P62962 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pfn1P62962 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pfn1P62962 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pfn1P62962 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pfn1P62962 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pfn1P62962 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pfn1P62962 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pfn1P62962 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC15.23■□□□□ 0.03
Pfn1P62962 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Pfn1P62962 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pfn1P62962 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pfn1P62962 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pfn1P62962 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Pfn1P62962 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pfn1P62962 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pfn1P62962 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC15.23■□□□□ 0.03
Pfn1P62962 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pfn1P62962 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pfn1P62962 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pfn1P62962 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pfn1P62962 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pfn1P62962 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pfn1P62962 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pfn1P62962 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pfn1P62962 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pfn1P62962 Gm45141-201ENSMUST00000206502 1888 ntBASIC15.22■□□□□ 0.03
Pfn1P62962 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pfn1P62962 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pfn1P62962 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC15.22■□□□□ 0.03
Pfn1P62962 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Pfn1P62962 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Pfn1P62962 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC15.22■□□□□ 0.03
Pfn1P62962 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Pfn1P62962 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pfn1P62962 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC15.21■□□□□ 0.03
Pfn1P62962 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pfn1P62962 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pfn1P62962 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pfn1P62962 Gm27502-201ENSMUST00000183495 199 ntBASIC15.21■□□□□ 0.03
Pfn1P62962 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms