Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav8n-2A0A075B633 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Trav8n-2A0A075B633 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav8n-2A0A075B633 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav8n-2A0A075B633 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav8n-2A0A075B633 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav8n-2A0A075B633 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav8n-2A0A075B633 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav8n-2A0A075B633 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trav8n-2A0A075B633 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.15■□□□□ 0.5
Trav8n-2A0A075B633 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
Trav8n-2A0A075B633 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav8n-2A0A075B633 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.14■□□□□ 0.5
Trav8n-2A0A075B633 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Trav8n-2A0A075B633 Gm12441-201ENSMUST00000121806 588 ntBASIC18.14■□□□□ 0.49
Trav8n-2A0A075B633 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.14■□□□□ 0.49
Trav8n-2A0A075B633 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC18.14■□□□□ 0.49
Trav8n-2A0A075B633 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Trav8n-2A0A075B633 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trav8n-2A0A075B633 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Trav8n-2A0A075B633 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav8n-2A0A075B633 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav8n-2A0A075B633 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav8n-2A0A075B633 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.13■□□□□ 0.49
Trav8n-2A0A075B633 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.13■□□□□ 0.49
Trav8n-2A0A075B633 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Trav8n-2A0A075B633 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
Trav8n-2A0A075B633 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav8n-2A0A075B633 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.13■□□□□ 0.49
Trav8n-2A0A075B633 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav8n-2A0A075B633 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav8n-2A0A075B633 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav8n-2A0A075B633 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav8n-2A0A075B633 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav8n-2A0A075B633 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.12■□□□□ 0.49
Trav8n-2A0A075B633 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav8n-2A0A075B633 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trav8n-2A0A075B633 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav8n-2A0A075B633 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav8n-2A0A075B633 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav8n-2A0A075B633 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trav8n-2A0A075B633 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav8n-2A0A075B633 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav8n-2A0A075B633 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav8n-2A0A075B633 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav8n-2A0A075B633 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trav8n-2A0A075B633 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.11■□□□□ 0.49
Trav8n-2A0A075B633 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.11■□□□□ 0.49
Trav8n-2A0A075B633 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav8n-2A0A075B633 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Trav8n-2A0A075B633 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Trav8n-2A0A075B633 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav8n-2A0A075B633 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav8n-2A0A075B633 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav8n-2A0A075B633 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav8n-2A0A075B633 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav8n-2A0A075B633 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav8n-2A0A075B633 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trav8n-2A0A075B633 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.11■□□□□ 0.49
Trav8n-2A0A075B633 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav8n-2A0A075B633 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav8n-2A0A075B633 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav8n-2A0A075B633 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav8n-2A0A075B633 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.1■□□□□ 0.49
Trav8n-2A0A075B633 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav8n-2A0A075B633 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.1■□□□□ 0.49
Trav8n-2A0A075B633 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Trav8n-2A0A075B633 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav8n-2A0A075B633 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav8n-2A0A075B633 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav8n-2A0A075B633 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
Trav8n-2A0A075B633 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav8n-2A0A075B633 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trav8n-2A0A075B633 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trav8n-2A0A075B633 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trav8n-2A0A075B633 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trav8n-2A0A075B633 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav8n-2A0A075B633 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.08■□□□□ 0.48
Trav8n-2A0A075B633 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav8n-2A0A075B633 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav8n-2A0A075B633 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav8n-2A0A075B633 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav8n-2A0A075B633 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav8n-2A0A075B633 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Trav8n-2A0A075B633 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.07■□□□□ 0.48
Trav8n-2A0A075B633 Nespas-201ENSMUST00000143738 1083 ntBASIC18.07■□□□□ 0.48
Trav8n-2A0A075B633 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Trav8n-2A0A075B633 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.07■□□□□ 0.48
Trav8n-2A0A075B633 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Trav8n-2A0A075B633 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Trav8n-2A0A075B633 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav8n-2A0A075B633 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Trav8n-2A0A075B633 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Trav8n-2A0A075B633 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav8n-2A0A075B633 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav8n-2A0A075B633 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav8n-2A0A075B633 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav8n-2A0A075B633 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Trav8n-2A0A075B633 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav8n-2A0A075B633 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms