Protein–RNA interactions for Protein: Q9DA80

Rsph3b, Radial spoke head protein 3 homolog B, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph3bQ9DA80 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.72■■□□□ 1.07
Rsph3bQ9DA80 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Rsph3bQ9DA80 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rsph3bQ9DA80 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rsph3bQ9DA80 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC21.72■■□□□ 1.07
Rsph3bQ9DA80 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC21.72■■□□□ 1.07
Rsph3bQ9DA80 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rsph3bQ9DA80 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rsph3bQ9DA80 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC21.72■■□□□ 1.07
Rsph3bQ9DA80 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rsph3bQ9DA80 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rsph3bQ9DA80 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rsph3bQ9DA80 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rsph3bQ9DA80 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rsph3bQ9DA80 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rsph3bQ9DA80 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rsph3bQ9DA80 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rsph3bQ9DA80 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rsph3bQ9DA80 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC21.71■■□□□ 1.07
Rsph3bQ9DA80 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rsph3bQ9DA80 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
Rsph3bQ9DA80 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rsph3bQ9DA80 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC21.7■■□□□ 1.06
Rsph3bQ9DA80 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Rsph3bQ9DA80 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Rsph3bQ9DA80 AC099934.2-201ENSMUST00000196389 70 ntBASIC21.7■■□□□ 1.06
Rsph3bQ9DA80 AC156953.1-201ENSMUST00000196953 70 ntBASIC21.7■■□□□ 1.06
Rsph3bQ9DA80 AC157822.2-201ENSMUST00000200291 70 ntBASIC21.7■■□□□ 1.06
Rsph3bQ9DA80 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC21.7■■□□□ 1.06
Rsph3bQ9DA80 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC21.7■■□□□ 1.06
Rsph3bQ9DA80 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rsph3bQ9DA80 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rsph3bQ9DA80 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Rsph3bQ9DA80 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC21.69■■□□□ 1.06
Rsph3bQ9DA80 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rsph3bQ9DA80 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Rsph3bQ9DA80 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rsph3bQ9DA80 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rsph3bQ9DA80 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.68■■□□□ 1.06
Rsph3bQ9DA80 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Rsph3bQ9DA80 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rsph3bQ9DA80 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rsph3bQ9DA80 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rsph3bQ9DA80 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rsph3bQ9DA80 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rsph3bQ9DA80 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rsph3bQ9DA80 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rsph3bQ9DA80 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Rsph3bQ9DA80 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC21.67■■□□□ 1.06
Rsph3bQ9DA80 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Rsph3bQ9DA80 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rsph3bQ9DA80 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC21.67■■□□□ 1.06
Rsph3bQ9DA80 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.67■■□□□ 1.06
Rsph3bQ9DA80 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.67■■□□□ 1.06
Rsph3bQ9DA80 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rsph3bQ9DA80 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rsph3bQ9DA80 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC21.66■■□□□ 1.06
Rsph3bQ9DA80 Gm10129-202ENSMUST00000193100 1316 ntBASIC21.66■■□□□ 1.06
Rsph3bQ9DA80 Gm42642-201ENSMUST00000200683 355 ntBASIC21.66■■□□□ 1.06
Rsph3bQ9DA80 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rsph3bQ9DA80 AC164629.5-201ENSMUST00000220387 632 ntBASIC21.66■■□□□ 1.06
Rsph3bQ9DA80 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Rsph3bQ9DA80 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
Rsph3bQ9DA80 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Rsph3bQ9DA80 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rsph3bQ9DA80 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC21.65■■□□□ 1.06
Rsph3bQ9DA80 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rsph3bQ9DA80 AC137127.1-201ENSMUST00000213466 1078 ntBASIC21.65■■□□□ 1.06
Rsph3bQ9DA80 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Rsph3bQ9DA80 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rsph3bQ9DA80 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Rsph3bQ9DA80 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Rsph3bQ9DA80 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Rsph3bQ9DA80 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Rsph3bQ9DA80 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Rsph3bQ9DA80 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rsph3bQ9DA80 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC21.64■■□□□ 1.05
Rsph3bQ9DA80 Gm42569-201ENSMUST00000200539 472 ntBASIC21.64■■□□□ 1.05
Rsph3bQ9DA80 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Rsph3bQ9DA80 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rsph3bQ9DA80 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rsph3bQ9DA80 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rsph3bQ9DA80 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rsph3bQ9DA80 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rsph3bQ9DA80 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rsph3bQ9DA80 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rsph3bQ9DA80 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC21.63■■□□□ 1.05
Rsph3bQ9DA80 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Rsph3bQ9DA80 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rsph3bQ9DA80 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rsph3bQ9DA80 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC21.63■■□□□ 1.05
Rsph3bQ9DA80 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC21.62■■□□□ 1.05
Rsph3bQ9DA80 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC21.62■■□□□ 1.05
Rsph3bQ9DA80 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rsph3bQ9DA80 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rsph3bQ9DA80 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rsph3bQ9DA80 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rsph3bQ9DA80 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.62■■□□□ 1.05
Rsph3bQ9DA80 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rsph3bQ9DA80 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms