Protein–RNA interactions for Protein: Q9D9H3

Mbd3l1, Methyl-CpG-binding domain protein 3-like 1, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3l1Q9D9H3 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Mbd3l1Q9D9H3 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Mbd3l1Q9D9H3 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Mbd3l1Q9D9H3 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Mbd3l1Q9D9H3 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Mbd3l1Q9D9H3 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Mbd3l1Q9D9H3 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Mbd3l1Q9D9H3 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Mbd3l1Q9D9H3 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Mbd3l1Q9D9H3 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Mbd3l1Q9D9H3 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mbd3l1Q9D9H3 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mbd3l1Q9D9H3 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Mbd3l1Q9D9H3 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mbd3l1Q9D9H3 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Mbd3l1Q9D9H3 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mbd3l1Q9D9H3 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mbd3l1Q9D9H3 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mbd3l1Q9D9H3 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mbd3l1Q9D9H3 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Mbd3l1Q9D9H3 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Mbd3l1Q9D9H3 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Mbd3l1Q9D9H3 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC17.16■□□□□ 0.34
Mbd3l1Q9D9H3 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
Mbd3l1Q9D9H3 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Mbd3l1Q9D9H3 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mbd3l1Q9D9H3 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.16■□□□□ 0.34
Mbd3l1Q9D9H3 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Mbd3l1Q9D9H3 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mbd3l1Q9D9H3 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Mbd3l1Q9D9H3 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mbd3l1Q9D9H3 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.15■□□□□ 0.34
Mbd3l1Q9D9H3 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mbd3l1Q9D9H3 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mbd3l1Q9D9H3 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mbd3l1Q9D9H3 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mbd3l1Q9D9H3 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mbd3l1Q9D9H3 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Mbd3l1Q9D9H3 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Mbd3l1Q9D9H3 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mbd3l1Q9D9H3 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mbd3l1Q9D9H3 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mbd3l1Q9D9H3 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mbd3l1Q9D9H3 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Mbd3l1Q9D9H3 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Mbd3l1Q9D9H3 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Mbd3l1Q9D9H3 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mbd3l1Q9D9H3 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mbd3l1Q9D9H3 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC17.14■□□□□ 0.33
Mbd3l1Q9D9H3 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mbd3l1Q9D9H3 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Mbd3l1Q9D9H3 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mbd3l1Q9D9H3 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mbd3l1Q9D9H3 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mbd3l1Q9D9H3 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mbd3l1Q9D9H3 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mbd3l1Q9D9H3 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mbd3l1Q9D9H3 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mbd3l1Q9D9H3 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mbd3l1Q9D9H3 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mbd3l1Q9D9H3 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Mbd3l1Q9D9H3 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.13■□□□□ 0.33
Mbd3l1Q9D9H3 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mbd3l1Q9D9H3 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Mbd3l1Q9D9H3 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mbd3l1Q9D9H3 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mbd3l1Q9D9H3 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mbd3l1Q9D9H3 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mbd3l1Q9D9H3 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mbd3l1Q9D9H3 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mbd3l1Q9D9H3 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mbd3l1Q9D9H3 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
Mbd3l1Q9D9H3 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mbd3l1Q9D9H3 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mbd3l1Q9D9H3 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Mbd3l1Q9D9H3 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Mbd3l1Q9D9H3 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.12■□□□□ 0.33
Mbd3l1Q9D9H3 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mbd3l1Q9D9H3 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mbd3l1Q9D9H3 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mbd3l1Q9D9H3 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mbd3l1Q9D9H3 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mbd3l1Q9D9H3 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.12■□□□□ 0.33
Mbd3l1Q9D9H3 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Mbd3l1Q9D9H3 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Mbd3l1Q9D9H3 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC17.11■□□□□ 0.33
Mbd3l1Q9D9H3 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mbd3l1Q9D9H3 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.11■□□□□ 0.33
Mbd3l1Q9D9H3 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.11■□□□□ 0.33
Mbd3l1Q9D9H3 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Mbd3l1Q9D9H3 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mbd3l1Q9D9H3 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Mbd3l1Q9D9H3 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.11■□□□□ 0.33
Mbd3l1Q9D9H3 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Mbd3l1Q9D9H3 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Mbd3l1Q9D9H3 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mbd3l1Q9D9H3 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mbd3l1Q9D9H3 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mbd3l1Q9D9H3 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mbd3l1Q9D9H3 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms