Protein–RNA interactions for Protein: Q9CQE0

Rnf138, E3 ubiquitin-protein ligase RNF138, mousemouse

Known RBP Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf138Q9CQE0 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rnf138Q9CQE0 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.72■□□□□ 0.59
Rnf138Q9CQE0 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Rnf138Q9CQE0 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Rnf138Q9CQE0 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rnf138Q9CQE0 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Rnf138Q9CQE0 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rnf138Q9CQE0 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rnf138Q9CQE0 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rnf138Q9CQE0 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rnf138Q9CQE0 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rnf138Q9CQE0 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rnf138Q9CQE0 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rnf138Q9CQE0 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.71■□□□□ 0.59
Rnf138Q9CQE0 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rnf138Q9CQE0 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rnf138Q9CQE0 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rnf138Q9CQE0 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rnf138Q9CQE0 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rnf138Q9CQE0 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.71■□□□□ 0.59
Rnf138Q9CQE0 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Rnf138Q9CQE0 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rnf138Q9CQE0 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf138Q9CQE0 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf138Q9CQE0 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf138Q9CQE0 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf138Q9CQE0 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.7■□□□□ 0.58
Rnf138Q9CQE0 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.7■□□□□ 0.58
Rnf138Q9CQE0 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf138Q9CQE0 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf138Q9CQE0 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf138Q9CQE0 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.7■□□□□ 0.58
Rnf138Q9CQE0 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf138Q9CQE0 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
Rnf138Q9CQE0 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.69■□□□□ 0.58
Rnf138Q9CQE0 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf138Q9CQE0 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.69■□□□□ 0.58
Rnf138Q9CQE0 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf138Q9CQE0 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.68■□□□□ 0.58
Rnf138Q9CQE0 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf138Q9CQE0 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Rnf138Q9CQE0 Gm27801-201ENSMUST00000184174 223 ntBASIC18.68■□□□□ 0.58
Rnf138Q9CQE0 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf138Q9CQE0 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf138Q9CQE0 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf138Q9CQE0 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.67■□□□□ 0.58
Rnf138Q9CQE0 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf138Q9CQE0 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf138Q9CQE0 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf138Q9CQE0 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf138Q9CQE0 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf138Q9CQE0 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf138Q9CQE0 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf138Q9CQE0 Gm10849-201ENSMUST00000100397 618 ntBASIC18.66■□□□□ 0.58
Rnf138Q9CQE0 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf138Q9CQE0 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.66■□□□□ 0.58
Rnf138Q9CQE0 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.66■□□□□ 0.58
Rnf138Q9CQE0 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.66■□□□□ 0.58
Rnf138Q9CQE0 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.66■□□□□ 0.58
Rnf138Q9CQE0 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.66■□□□□ 0.58
Rnf138Q9CQE0 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf138Q9CQE0 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.65■□□□□ 0.58
Rnf138Q9CQE0 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf138Q9CQE0 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Rnf138Q9CQE0 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf138Q9CQE0 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.65■□□□□ 0.58
Rnf138Q9CQE0 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
Rnf138Q9CQE0 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf138Q9CQE0 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf138Q9CQE0 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Rnf138Q9CQE0 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf138Q9CQE0 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.65■□□□□ 0.58
Rnf138Q9CQE0 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf138Q9CQE0 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf138Q9CQE0 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
Rnf138Q9CQE0 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf138Q9CQE0 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf138Q9CQE0 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.64■□□□□ 0.57
Rnf138Q9CQE0 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf138Q9CQE0 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf138Q9CQE0 AA386476-201ENSMUST00000098781 1665 ntBASIC18.63■□□□□ 0.57
Rnf138Q9CQE0 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf138Q9CQE0 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf138Q9CQE0 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf138Q9CQE0 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.63■□□□□ 0.57
Rnf138Q9CQE0 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.63■□□□□ 0.57
Rnf138Q9CQE0 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf138Q9CQE0 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf138Q9CQE0 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.63■□□□□ 0.57
Rnf138Q9CQE0 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Rnf138Q9CQE0 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf138Q9CQE0 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.62■□□□□ 0.57
Rnf138Q9CQE0 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.62■□□□□ 0.57
Rnf138Q9CQE0 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf138Q9CQE0 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf138Q9CQE0 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf138Q9CQE0 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf138Q9CQE0 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf138Q9CQE0 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf138Q9CQE0 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms