Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scrt1Q99M85 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scrt1Q99M85 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Scrt1Q99M85 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.35■□□□□ 0.37
Scrt1Q99M85 Gm43530-201ENSMUST00000195920 274 ntBASIC17.35■□□□□ 0.37
Scrt1Q99M85 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.35■□□□□ 0.37
Scrt1Q99M85 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scrt1Q99M85 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scrt1Q99M85 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Scrt1Q99M85 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scrt1Q99M85 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scrt1Q99M85 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scrt1Q99M85 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.34■□□□□ 0.37
Scrt1Q99M85 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scrt1Q99M85 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.34■□□□□ 0.37
Scrt1Q99M85 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.34■□□□□ 0.37
Scrt1Q99M85 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scrt1Q99M85 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scrt1Q99M85 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scrt1Q99M85 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Scrt1Q99M85 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.33■□□□□ 0.37
Scrt1Q99M85 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Scrt1Q99M85 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scrt1Q99M85 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Scrt1Q99M85 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scrt1Q99M85 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.33■□□□□ 0.36
Scrt1Q99M85 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Scrt1Q99M85 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scrt1Q99M85 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scrt1Q99M85 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scrt1Q99M85 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scrt1Q99M85 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scrt1Q99M85 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC17.32■□□□□ 0.36
Scrt1Q99M85 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Scrt1Q99M85 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scrt1Q99M85 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scrt1Q99M85 Gm42778-201ENSMUST00000199644 553 ntBASIC17.32■□□□□ 0.36
Scrt1Q99M85 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scrt1Q99M85 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Scrt1Q99M85 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.32■□□□□ 0.36
Scrt1Q99M85 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Scrt1Q99M85 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scrt1Q99M85 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Scrt1Q99M85 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC17.32■□□□□ 0.36
Scrt1Q99M85 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.32■□□□□ 0.36
Scrt1Q99M85 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.32■□□□□ 0.36
Scrt1Q99M85 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.31■□□□□ 0.36
Scrt1Q99M85 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Scrt1Q99M85 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scrt1Q99M85 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.31■□□□□ 0.36
Scrt1Q99M85 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scrt1Q99M85 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scrt1Q99M85 Gm10602-201ENSMUST00000098239 609 ntBASIC17.31■□□□□ 0.36
Scrt1Q99M85 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Scrt1Q99M85 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scrt1Q99M85 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Scrt1Q99M85 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Scrt1Q99M85 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scrt1Q99M85 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
Scrt1Q99M85 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scrt1Q99M85 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scrt1Q99M85 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Scrt1Q99M85 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Scrt1Q99M85 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.3■□□□□ 0.36
Scrt1Q99M85 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scrt1Q99M85 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scrt1Q99M85 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scrt1Q99M85 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Scrt1Q99M85 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Scrt1Q99M85 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Scrt1Q99M85 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scrt1Q99M85 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scrt1Q99M85 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scrt1Q99M85 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scrt1Q99M85 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Scrt1Q99M85 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scrt1Q99M85 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scrt1Q99M85 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scrt1Q99M85 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Scrt1Q99M85 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scrt1Q99M85 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scrt1Q99M85 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Scrt1Q99M85 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.28■□□□□ 0.36
Scrt1Q99M85 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scrt1Q99M85 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Scrt1Q99M85 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scrt1Q99M85 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Scrt1Q99M85 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.28■□□□□ 0.36
Scrt1Q99M85 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scrt1Q99M85 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.28■□□□□ 0.36
Scrt1Q99M85 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Scrt1Q99M85 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scrt1Q99M85 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scrt1Q99M85 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scrt1Q99M85 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scrt1Q99M85 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scrt1Q99M85 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scrt1Q99M85 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scrt1Q99M85 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Scrt1Q99M85 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms