Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Q8VDP2 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Q8VDP2 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Q8VDP2 Mir6538-201ENSMUST00000183713 110 ntBASIC19.23■□□□□ 0.67
Q8VDP2 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Q8VDP2 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Q8VDP2 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC19.23■□□□□ 0.67
Q8VDP2 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Q8VDP2 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Q8VDP2 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Q8VDP2 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Q8VDP2 Gm43702-201ENSMUST00000198772 2546 ntBASIC19.22■□□□□ 0.67
Q8VDP2 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.22■□□□□ 0.67
Q8VDP2 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Q8VDP2 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Q8VDP2 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Q8VDP2 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Q8VDP2 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Q8VDP2 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Q8VDP2 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Q8VDP2 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Q8VDP2 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.21■□□□□ 0.67
Q8VDP2 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Q8VDP2 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Q8VDP2 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.2■□□□□ 0.66
Q8VDP2 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Q8VDP2 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Q8VDP2 AC167019.3-201ENSMUST00000228225 1266 ntBASIC19.2■□□□□ 0.66
Q8VDP2 Gm6311-201ENSMUST00000073790 878 ntBASIC19.2■□□□□ 0.66
Q8VDP2 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Q8VDP2 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Q8VDP2 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.2■□□□□ 0.66
Q8VDP2 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Q8VDP2 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Q8VDP2 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Q8VDP2 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Q8VDP2 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Q8VDP2 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Q8VDP2 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Q8VDP2 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Q8VDP2 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Q8VDP2 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Q8VDP2 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.18■□□□□ 0.66
Q8VDP2 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Q8VDP2 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Q8VDP2 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Q8VDP2 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Q8VDP2 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Q8VDP2 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Q8VDP2 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.18■□□□□ 0.66
Q8VDP2 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Q8VDP2 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Q8VDP2 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Q8VDP2 Gm45412-201ENSMUST00000210217 2275 ntBASIC19.17■□□□□ 0.66
Q8VDP2 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Q8VDP2 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Q8VDP2 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Q8VDP2 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Q8VDP2 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Q8VDP2 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Q8VDP2 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Q8VDP2 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Q8VDP2 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.17■□□□□ 0.66
Q8VDP2 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.17■□□□□ 0.66
Q8VDP2 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Q8VDP2 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Q8VDP2 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
Q8VDP2 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Q8VDP2 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Q8VDP2 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Q8VDP2 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Q8VDP2 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Q8VDP2 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Q8VDP2 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Q8VDP2 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Q8VDP2 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Q8VDP2 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
Q8VDP2 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
Q8VDP2 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Q8VDP2 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Q8VDP2 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Q8VDP2 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Q8VDP2 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Q8VDP2 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Q8VDP2 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Q8VDP2 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Q8VDP2 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Q8VDP2 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.14■□□□□ 0.65
Q8VDP2 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Q8VDP2 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Q8VDP2 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
Q8VDP2 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Q8VDP2 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Q8VDP2 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Q8VDP2 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Q8VDP2 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.13■□□□□ 0.65
Q8VDP2 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Q8VDP2 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Q8VDP2 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Q8VDP2 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms