Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.82■■□□□ 1.08
Rpap2Q8VC34 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rpap2Q8VC34 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC21.82■■□□□ 1.08
Rpap2Q8VC34 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.82■■□□□ 1.08
Rpap2Q8VC34 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Rpap2Q8VC34 Cdkn3-203ENSMUST00000227149 1952 ntBASIC21.81■■□□□ 1.08
Rpap2Q8VC34 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rpap2Q8VC34 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rpap2Q8VC34 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rpap2Q8VC34 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rpap2Q8VC34 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rpap2Q8VC34 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rpap2Q8VC34 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Rpap2Q8VC34 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rpap2Q8VC34 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Rpap2Q8VC34 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rpap2Q8VC34 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Rpap2Q8VC34 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rpap2Q8VC34 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC21.8■■□□□ 1.08
Rpap2Q8VC34 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Rpap2Q8VC34 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC21.8■■□□□ 1.08
Rpap2Q8VC34 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rpap2Q8VC34 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rpap2Q8VC34 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Rpap2Q8VC34 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rpap2Q8VC34 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Rpap2Q8VC34 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rpap2Q8VC34 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Rpap2Q8VC34 Gm43137-201ENSMUST00000198052 594 ntBASIC21.8■■□□□ 1.08
Rpap2Q8VC34 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rpap2Q8VC34 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rpap2Q8VC34 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Rpap2Q8VC34 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Rpap2Q8VC34 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rpap2Q8VC34 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rpap2Q8VC34 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Rpap2Q8VC34 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Rpap2Q8VC34 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Rpap2Q8VC34 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rpap2Q8VC34 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rpap2Q8VC34 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rpap2Q8VC34 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Rpap2Q8VC34 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Rpap2Q8VC34 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21.79■■□□□ 1.08
Rpap2Q8VC34 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rpap2Q8VC34 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Rpap2Q8VC34 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Rpap2Q8VC34 Gm34220-201ENSMUST00000223001 2709 ntBASIC21.78■■□□□ 1.08
Rpap2Q8VC34 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Rpap2Q8VC34 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC21.78■■□□□ 1.08
Rpap2Q8VC34 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC21.78■■□□□ 1.08
Rpap2Q8VC34 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rpap2Q8VC34 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Rpap2Q8VC34 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rpap2Q8VC34 Gm10209-201ENSMUST00000203397 1607 ntBASIC21.77■■□□□ 1.08
Rpap2Q8VC34 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.77■■□□□ 1.08
Rpap2Q8VC34 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.77■■□□□ 1.08
Rpap2Q8VC34 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Rpap2Q8VC34 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rpap2Q8VC34 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rpap2Q8VC34 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Rpap2Q8VC34 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rpap2Q8VC34 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC21.77■■□□□ 1.08
Rpap2Q8VC34 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Rpap2Q8VC34 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC21.77■■□□□ 1.07
Rpap2Q8VC34 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
Rpap2Q8VC34 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rpap2Q8VC34 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rpap2Q8VC34 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.76■■□□□ 1.07
Rpap2Q8VC34 Gm12821-201ENSMUST00000120022 600 ntBASIC21.76■■□□□ 1.07
Rpap2Q8VC34 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Rpap2Q8VC34 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC21.76■■□□□ 1.07
Rpap2Q8VC34 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Rpap2Q8VC34 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rpap2Q8VC34 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC21.76■■□□□ 1.07
Rpap2Q8VC34 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Rpap2Q8VC34 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rpap2Q8VC34 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rpap2Q8VC34 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rpap2Q8VC34 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC21.75■■□□□ 1.07
Rpap2Q8VC34 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rpap2Q8VC34 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Rpap2Q8VC34 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rpap2Q8VC34 Gm6802-201ENSMUST00000167843 1983 ntBASIC21.74■■□□□ 1.07
Rpap2Q8VC34 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Rpap2Q8VC34 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rpap2Q8VC34 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rpap2Q8VC34 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rpap2Q8VC34 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rpap2Q8VC34 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rpap2Q8VC34 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Rpap2Q8VC34 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rpap2Q8VC34 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Rpap2Q8VC34 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC21.73■■□□□ 1.07
Rpap2Q8VC34 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rpap2Q8VC34 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Rpap2Q8VC34 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rpap2Q8VC34 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rpap2Q8VC34 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rpap2Q8VC34 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms