Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Trim52Q8CDV4 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Trim52Q8CDV4 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Trim52Q8CDV4 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC24.79■■□□□ 1.56
Trim52Q8CDV4 Gm9988-201ENSMUST00000069786 435 ntBASIC24.79■■□□□ 1.56
Trim52Q8CDV4 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Trim52Q8CDV4 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Trim52Q8CDV4 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Trim52Q8CDV4 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Trim52Q8CDV4 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Trim52Q8CDV4 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Trim52Q8CDV4 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Trim52Q8CDV4 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC24.78■■□□□ 1.56
Trim52Q8CDV4 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC24.78■■□□□ 1.56
Trim52Q8CDV4 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Trim52Q8CDV4 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
Trim52Q8CDV4 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Trim52Q8CDV4 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Trim52Q8CDV4 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
Trim52Q8CDV4 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC24.78■■□□□ 1.56
Trim52Q8CDV4 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Trim52Q8CDV4 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Trim52Q8CDV4 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC24.77■■□□□ 1.56
Trim52Q8CDV4 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Trim52Q8CDV4 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC24.77■■□□□ 1.56
Trim52Q8CDV4 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Trim52Q8CDV4 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Trim52Q8CDV4 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
Trim52Q8CDV4 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Trim52Q8CDV4 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC24.76■■□□□ 1.55
Trim52Q8CDV4 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Trim52Q8CDV4 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Trim52Q8CDV4 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Trim52Q8CDV4 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Trim52Q8CDV4 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Trim52Q8CDV4 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Trim52Q8CDV4 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
Trim52Q8CDV4 Reep4-203ENSMUST00000226563 1444 ntBASIC24.76■■□□□ 1.55
Trim52Q8CDV4 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
Trim52Q8CDV4 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
Trim52Q8CDV4 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
Trim52Q8CDV4 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Trim52Q8CDV4 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Trim52Q8CDV4 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Trim52Q8CDV4 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC24.75■■□□□ 1.55
Trim52Q8CDV4 Gm13234-201ENSMUST00000120010 747 ntBASIC24.75■■□□□ 1.55
Trim52Q8CDV4 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC24.75■■□□□ 1.55
Trim52Q8CDV4 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC24.75■■□□□ 1.55
Trim52Q8CDV4 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
Trim52Q8CDV4 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC24.74■■□□□ 1.55
Trim52Q8CDV4 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Trim52Q8CDV4 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
Trim52Q8CDV4 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
Trim52Q8CDV4 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC24.74■■□□□ 1.55
Trim52Q8CDV4 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC24.74■■□□□ 1.55
Trim52Q8CDV4 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC24.74■■□□□ 1.55
Trim52Q8CDV4 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Trim52Q8CDV4 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Trim52Q8CDV4 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Trim52Q8CDV4 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Trim52Q8CDV4 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC24.73■■□□□ 1.55
Trim52Q8CDV4 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Trim52Q8CDV4 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC24.73■■□□□ 1.55
Trim52Q8CDV4 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC24.73■■□□□ 1.55
Trim52Q8CDV4 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC24.73■■□□□ 1.55
Trim52Q8CDV4 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Trim52Q8CDV4 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Trim52Q8CDV4 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Trim52Q8CDV4 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Trim52Q8CDV4 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
Trim52Q8CDV4 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Trim52Q8CDV4 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Trim52Q8CDV4 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC24.72■■□□□ 1.55
Trim52Q8CDV4 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC24.72■■□□□ 1.55
Trim52Q8CDV4 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC24.72■■□□□ 1.55
Trim52Q8CDV4 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Trim52Q8CDV4 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
Trim52Q8CDV4 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC24.71■■□□□ 1.55
Trim52Q8CDV4 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC24.71■■□□□ 1.55
Trim52Q8CDV4 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
Trim52Q8CDV4 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC24.7■■□□□ 1.55
Trim52Q8CDV4 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC24.7■■□□□ 1.54
Trim52Q8CDV4 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Trim52Q8CDV4 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Trim52Q8CDV4 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Trim52Q8CDV4 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Trim52Q8CDV4 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Trim52Q8CDV4 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Trim52Q8CDV4 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC24.69■■□□□ 1.54
Trim52Q8CDV4 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Trim52Q8CDV4 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Trim52Q8CDV4 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC24.68■■□□□ 1.54
Trim52Q8CDV4 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
Trim52Q8CDV4 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
Trim52Q8CDV4 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Trim52Q8CDV4 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Trim52Q8CDV4 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Trim52Q8CDV4 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
Trim52Q8CDV4 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC24.67■■□□□ 1.54
Trim52Q8CDV4 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC24.67■■□□□ 1.54
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms