Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Tubgcp3P58854 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Tubgcp3P58854 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Tubgcp3P58854 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tubgcp3P58854 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.22■□□□□ 0.83
Tubgcp3P58854 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tubgcp3P58854 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tubgcp3P58854 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tubgcp3P58854 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tubgcp3P58854 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tubgcp3P58854 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tubgcp3P58854 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tubgcp3P58854 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Tubgcp3P58854 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tubgcp3P58854 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tubgcp3P58854 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tubgcp3P58854 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Tubgcp3P58854 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.21■□□□□ 0.83
Tubgcp3P58854 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tubgcp3P58854 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tubgcp3P58854 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.21■□□□□ 0.83
Tubgcp3P58854 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tubgcp3P58854 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tubgcp3P58854 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tubgcp3P58854 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tubgcp3P58854 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Tubgcp3P58854 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.83
Tubgcp3P58854 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tubgcp3P58854 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tubgcp3P58854 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tubgcp3P58854 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.2■□□□□ 0.82
Tubgcp3P58854 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.2■□□□□ 0.82
Tubgcp3P58854 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Tubgcp3P58854 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tubgcp3P58854 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Tubgcp3P58854 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Tubgcp3P58854 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tubgcp3P58854 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tubgcp3P58854 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Tubgcp3P58854 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Tubgcp3P58854 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tubgcp3P58854 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tubgcp3P58854 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tubgcp3P58854 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tubgcp3P58854 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Tubgcp3P58854 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.19■□□□□ 0.82
Tubgcp3P58854 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.19■□□□□ 0.82
Tubgcp3P58854 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.19■□□□□ 0.82
Tubgcp3P58854 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Tubgcp3P58854 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Tubgcp3P58854 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tubgcp3P58854 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.18■□□□□ 0.82
Tubgcp3P58854 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tubgcp3P58854 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.18■□□□□ 0.82
Tubgcp3P58854 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tubgcp3P58854 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Tubgcp3P58854 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Tubgcp3P58854 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Tubgcp3P58854 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Tubgcp3P58854 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.17■□□□□ 0.82
Tubgcp3P58854 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tubgcp3P58854 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tubgcp3P58854 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tubgcp3P58854 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Tubgcp3P58854 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tubgcp3P58854 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Tubgcp3P58854 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Tubgcp3P58854 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Tubgcp3P58854 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tubgcp3P58854 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.16■□□□□ 0.82
Tubgcp3P58854 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Tubgcp3P58854 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tubgcp3P58854 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
Tubgcp3P58854 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Tubgcp3P58854 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Tubgcp3P58854 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Tubgcp3P58854 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tubgcp3P58854 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Tubgcp3P58854 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Tubgcp3P58854 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tubgcp3P58854 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tubgcp3P58854 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tubgcp3P58854 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tubgcp3P58854 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.14■□□□□ 0.81
Tubgcp3P58854 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tubgcp3P58854 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tubgcp3P58854 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Tubgcp3P58854 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Tubgcp3P58854 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Tubgcp3P58854 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tubgcp3P58854 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.13■□□□□ 0.81
Tubgcp3P58854 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.13■□□□□ 0.81
Tubgcp3P58854 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tubgcp3P58854 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Tubgcp3P58854 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.12■□□□□ 0.81
Tubgcp3P58854 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tubgcp3P58854 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.12■□□□□ 0.81
Tubgcp3P58854 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tubgcp3P58854 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tubgcp3P58854 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms