Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC29.45■■■□□ 2.31
NclP09405 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
NclP09405 AC137127.1-201ENSMUST00000213466 1078 ntBASIC29.45■■■□□ 2.31
NclP09405 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
NclP09405 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
NclP09405 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC29.44■■■□□ 2.3
NclP09405 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC29.44■■■□□ 2.3
NclP09405 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
NclP09405 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC29.44■■■□□ 2.3
NclP09405 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC29.43■■■□□ 2.3
NclP09405 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
NclP09405 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC29.43■■■□□ 2.3
NclP09405 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC29.43■■■□□ 2.3
NclP09405 Gm5297-201ENSMUST00000198555 1171 ntBASIC29.43■■■□□ 2.3
NclP09405 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC29.43■■■□□ 2.3
NclP09405 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC29.43■■■□□ 2.3
NclP09405 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
NclP09405 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
NclP09405 Gm42642-201ENSMUST00000200683 355 ntBASIC29.42■■■□□ 2.3
NclP09405 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
NclP09405 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC29.42■■■□□ 2.3
NclP09405 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC29.41■■■□□ 2.3
NclP09405 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
NclP09405 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
NclP09405 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC29.41■■■□□ 2.3
NclP09405 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
NclP09405 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC29.41■■■□□ 2.3
NclP09405 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
NclP09405 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
NclP09405 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
NclP09405 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC29.4■■■□□ 2.3
NclP09405 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC29.4■■■□□ 2.3
NclP09405 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC29.4■■■□□ 2.3
NclP09405 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
NclP09405 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC29.39■■■□□ 2.3
NclP09405 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
NclP09405 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC29.39■■■□□ 2.3
NclP09405 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
NclP09405 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC29.39■■■□□ 2.3
NclP09405 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
NclP09405 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC29.39■■■□□ 2.3
NclP09405 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC29.39■■■□□ 2.3
NclP09405 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
NclP09405 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
NclP09405 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC29.38■■■□□ 2.29
NclP09405 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
NclP09405 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
NclP09405 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC29.38■■■□□ 2.29
NclP09405 AC164629.5-201ENSMUST00000220387 632 ntBASIC29.38■■■□□ 2.29
NclP09405 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
NclP09405 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC29.38■■■□□ 2.29
NclP09405 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC29.37■■■□□ 2.29
NclP09405 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC29.37■■■□□ 2.29
NclP09405 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
NclP09405 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC29.36■■■□□ 2.29
NclP09405 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
NclP09405 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC29.36■■■□□ 2.29
NclP09405 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC29.36■■■□□ 2.29
NclP09405 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC29.36■■■□□ 2.29
NclP09405 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
NclP09405 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC29.36■■■□□ 2.29
NclP09405 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
NclP09405 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC29.35■■■□□ 2.29
NclP09405 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC29.35■■■□□ 2.29
NclP09405 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC29.35■■■□□ 2.29
NclP09405 Gm26571-201ENSMUST00000181399 666 ntBASIC29.35■■■□□ 2.29
NclP09405 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC29.35■■■□□ 2.29
NclP09405 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC29.35■■■□□ 2.29
NclP09405 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC29.35■■■□□ 2.29
NclP09405 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
NclP09405 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC29.34■■■□□ 2.29
NclP09405 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
NclP09405 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC29.34■■■□□ 2.29
NclP09405 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
NclP09405 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
NclP09405 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
NclP09405 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
NclP09405 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
NclP09405 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
NclP09405 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
NclP09405 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
NclP09405 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
NclP09405 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
NclP09405 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
NclP09405 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC29.32■■■□□ 2.28
NclP09405 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC29.32■■■□□ 2.28
NclP09405 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC29.32■■■□□ 2.28
NclP09405 Gm42569-201ENSMUST00000200539 472 ntBASIC29.32■■■□□ 2.28
NclP09405 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC29.32■■■□□ 2.28
NclP09405 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
NclP09405 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC29.32■■■□□ 2.28
NclP09405 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC29.32■■■□□ 2.28
NclP09405 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
NclP09405 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC29.31■■■□□ 2.28
NclP09405 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC29.31■■■□□ 2.28
NclP09405 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC29.31■■■□□ 2.28
NclP09405 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC29.3■■■□□ 2.28
NclP09405 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC29.3■■■□□ 2.28
NclP09405 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC29.3■■■□□ 2.28
NclP09405 Gm7291-201ENSMUST00000199147 382 ntBASIC29.3■■■□□ 2.28
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms