Protein–RNA interactions for Protein: E9Q8Q6

Ccdc141, Coiled-coil domain-containing 141, mousemouse

Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc141E9Q8Q6 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC30.41■■■□□ 2.46
Ccdc141E9Q8Q6 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Ccdc141E9Q8Q6 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Ccdc141E9Q8Q6 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC30.41■■■□□ 2.46
Ccdc141E9Q8Q6 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC30.41■■■□□ 2.46
Ccdc141E9Q8Q6 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC30.41■■■□□ 2.46
Ccdc141E9Q8Q6 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
Ccdc141E9Q8Q6 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC30.4■■■□□ 2.46
Ccdc141E9Q8Q6 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC30.4■■■□□ 2.46
Ccdc141E9Q8Q6 Gm5408-201ENSMUST00000197998 747 ntBASIC30.4■■■□□ 2.46
Ccdc141E9Q8Q6 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC30.4■■■□□ 2.46
Ccdc141E9Q8Q6 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Ccdc141E9Q8Q6 AC122428.2-201ENSMUST00000216321 1832 ntBASIC30.4■■■□□ 2.46
Ccdc141E9Q8Q6 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
Ccdc141E9Q8Q6 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC30.39■■■□□ 2.46
Ccdc141E9Q8Q6 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC30.39■■■□□ 2.46
Ccdc141E9Q8Q6 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Ccdc141E9Q8Q6 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
Ccdc141E9Q8Q6 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
Ccdc141E9Q8Q6 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC30.38■■■□□ 2.45
Ccdc141E9Q8Q6 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Ccdc141E9Q8Q6 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC30.38■■■□□ 2.45
Ccdc141E9Q8Q6 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Ccdc141E9Q8Q6 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC30.37■■■□□ 2.45
Ccdc141E9Q8Q6 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
Ccdc141E9Q8Q6 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Ccdc141E9Q8Q6 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC30.37■■■□□ 2.45
Ccdc141E9Q8Q6 Gm7290-201ENSMUST00000104990 617 ntBASIC30.37■■■□□ 2.45
Ccdc141E9Q8Q6 Gm12918-201ENSMUST00000120234 636 ntBASIC30.37■■■□□ 2.45
Ccdc141E9Q8Q6 Gm15710-201ENSMUST00000121821 636 ntBASIC30.37■■■□□ 2.45
Ccdc141E9Q8Q6 Gm5075-201ENSMUST00000196916 622 ntBASIC30.37■■■□□ 2.45
Ccdc141E9Q8Q6 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC30.37■■■□□ 2.45
Ccdc141E9Q8Q6 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC30.37■■■□□ 2.45
Ccdc141E9Q8Q6 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC30.37■■■□□ 2.45
Ccdc141E9Q8Q6 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Ccdc141E9Q8Q6 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Ccdc141E9Q8Q6 Gm6211-202ENSMUST00000167849 925 ntBASIC30.36■■■□□ 2.45
Ccdc141E9Q8Q6 Gm8520-201ENSMUST00000186517 868 ntBASIC30.36■■■□□ 2.45
Ccdc141E9Q8Q6 Gm3807-201ENSMUST00000193520 1168 ntBASIC30.36■■■□□ 2.45
Ccdc141E9Q8Q6 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC30.36■■■□□ 2.45
Ccdc141E9Q8Q6 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC30.36■■■□□ 2.45
Ccdc141E9Q8Q6 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Ccdc141E9Q8Q6 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Ccdc141E9Q8Q6 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Ccdc141E9Q8Q6 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC30.35■■■□□ 2.45
Ccdc141E9Q8Q6 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC30.35■■■□□ 2.45
Ccdc141E9Q8Q6 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC30.35■■■□□ 2.45
Ccdc141E9Q8Q6 Gm38205-201ENSMUST00000192243 258 ntBASIC30.35■■■□□ 2.45
Ccdc141E9Q8Q6 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC30.35■■■□□ 2.45
Ccdc141E9Q8Q6 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC30.35■■■□□ 2.45
Ccdc141E9Q8Q6 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC30.35■■■□□ 2.45
Ccdc141E9Q8Q6 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Ccdc141E9Q8Q6 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Ccdc141E9Q8Q6 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
Ccdc141E9Q8Q6 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC30.33■■■□□ 2.45
Ccdc141E9Q8Q6 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC30.33■■■□□ 2.45
Ccdc141E9Q8Q6 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC30.33■■■□□ 2.45
Ccdc141E9Q8Q6 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
Ccdc141E9Q8Q6 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC30.33■■■□□ 2.45
Ccdc141E9Q8Q6 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Ccdc141E9Q8Q6 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC30.33■■■□□ 2.45
Ccdc141E9Q8Q6 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC30.32■■■□□ 2.44
Ccdc141E9Q8Q6 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC30.32■■■□□ 2.44
Ccdc141E9Q8Q6 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Ccdc141E9Q8Q6 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Ccdc141E9Q8Q6 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
Ccdc141E9Q8Q6 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Ccdc141E9Q8Q6 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
Ccdc141E9Q8Q6 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Ccdc141E9Q8Q6 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC30.3■■■□□ 2.44
Ccdc141E9Q8Q6 Gm26524-201ENSMUST00000192339 390 ntBASIC30.3■■■□□ 2.44
Ccdc141E9Q8Q6 Gm20049-201ENSMUST00000219950 730 ntBASIC30.3■■■□□ 2.44
Ccdc141E9Q8Q6 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC30.29■■■□□ 2.44
Ccdc141E9Q8Q6 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC30.29■■■□□ 2.44
Ccdc141E9Q8Q6 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC30.29■■■□□ 2.44
Ccdc141E9Q8Q6 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
Ccdc141E9Q8Q6 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC30.29■■■□□ 2.44
Ccdc141E9Q8Q6 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
Ccdc141E9Q8Q6 AC122769.4-201ENSMUST00000228166 901 ntBASIC30.29■■■□□ 2.44
Ccdc141E9Q8Q6 Gm10655-201ENSMUST00000098658 1397 ntBASIC30.29■■■□□ 2.44
Ccdc141E9Q8Q6 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Ccdc141E9Q8Q6 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC30.28■■■□□ 2.44
Ccdc141E9Q8Q6 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Ccdc141E9Q8Q6 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC30.28■■■□□ 2.44
Ccdc141E9Q8Q6 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
Ccdc141E9Q8Q6 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC30.28■■■□□ 2.44
Ccdc141E9Q8Q6 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Ccdc141E9Q8Q6 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC30.28■■■□□ 2.44
Ccdc141E9Q8Q6 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC30.28■■■□□ 2.44
Ccdc141E9Q8Q6 Gm13168-201ENSMUST00000121771 632 ntBASIC30.27■■■□□ 2.44
Ccdc141E9Q8Q6 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Ccdc141E9Q8Q6 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC30.27■■■□□ 2.44
Ccdc141E9Q8Q6 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC30.27■■■□□ 2.44
Ccdc141E9Q8Q6 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC30.26■■■□□ 2.44
Ccdc141E9Q8Q6 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Ccdc141E9Q8Q6 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
Ccdc141E9Q8Q6 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
Ccdc141E9Q8Q6 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Ccdc141E9Q8Q6 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Ccdc141E9Q8Q6 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms