Protein–RNA interactions for Protein: A0A0B4J1P1

Trbv30, T cell receptor beta, variable 30 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv30A0A0B4J1P1 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv30A0A0B4J1P1 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv30A0A0B4J1P1 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv30A0A0B4J1P1 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Trbv30A0A0B4J1P1 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Trbv30A0A0B4J1P1 Gm12821-201ENSMUST00000120022 600 ntBASIC14.9□□□□□ -0.02
Trbv30A0A0B4J1P1 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC14.9□□□□□ -0.02
Trbv30A0A0B4J1P1 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv30A0A0B4J1P1 Gm21956-201ENSMUST00000179946 522 ntBASIC14.9□□□□□ -0.02
Trbv30A0A0B4J1P1 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv30A0A0B4J1P1 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv30A0A0B4J1P1 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv30A0A0B4J1P1 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Trbv30A0A0B4J1P1 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv30A0A0B4J1P1 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC14.9□□□□□ -0.02
Trbv30A0A0B4J1P1 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Trbv30A0A0B4J1P1 Gm38160-201ENSMUST00000193090 2499 ntBASIC14.9□□□□□ -0.02
Trbv30A0A0B4J1P1 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv30A0A0B4J1P1 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv30A0A0B4J1P1 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv30A0A0B4J1P1 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv30A0A0B4J1P1 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Trbv30A0A0B4J1P1 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC14.89□□□□□ -0.03
Trbv30A0A0B4J1P1 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv30A0A0B4J1P1 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trbv30A0A0B4J1P1 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv30A0A0B4J1P1 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv30A0A0B4J1P1 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv30A0A0B4J1P1 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv30A0A0B4J1P1 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv30A0A0B4J1P1 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv30A0A0B4J1P1 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv30A0A0B4J1P1 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv30A0A0B4J1P1 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv30A0A0B4J1P1 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv30A0A0B4J1P1 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv30A0A0B4J1P1 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv30A0A0B4J1P1 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
Trbv30A0A0B4J1P1 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv30A0A0B4J1P1 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv30A0A0B4J1P1 AC152827.1-201ENSMUST00000221143 2189 ntBASIC14.88□□□□□ -0.03
Trbv30A0A0B4J1P1 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Trbv30A0A0B4J1P1 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv30A0A0B4J1P1 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv30A0A0B4J1P1 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv30A0A0B4J1P1 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trbv30A0A0B4J1P1 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Trbv30A0A0B4J1P1 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC14.87□□□□□ -0.03
Trbv30A0A0B4J1P1 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC14.87□□□□□ -0.03
Trbv30A0A0B4J1P1 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC14.87□□□□□ -0.03
Trbv30A0A0B4J1P1 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv30A0A0B4J1P1 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC14.87□□□□□ -0.03
Trbv30A0A0B4J1P1 Appbp2os-202ENSMUST00000206972 447 ntBASIC14.87□□□□□ -0.03
Trbv30A0A0B4J1P1 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC14.87□□□□□ -0.03
Trbv30A0A0B4J1P1 Gm5576-201ENSMUST00000075809 1236 ntBASIC14.87□□□□□ -0.03
Trbv30A0A0B4J1P1 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv30A0A0B4J1P1 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trbv30A0A0B4J1P1 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trbv30A0A0B4J1P1 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv30A0A0B4J1P1 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv30A0A0B4J1P1 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Trbv30A0A0B4J1P1 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv30A0A0B4J1P1 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv30A0A0B4J1P1 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv30A0A0B4J1P1 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Trbv30A0A0B4J1P1 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Trbv30A0A0B4J1P1 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv30A0A0B4J1P1 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv30A0A0B4J1P1 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
Trbv30A0A0B4J1P1 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC14.86□□□□□ -0.03
Trbv30A0A0B4J1P1 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv30A0A0B4J1P1 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv30A0A0B4J1P1 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv30A0A0B4J1P1 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Trbv30A0A0B4J1P1 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv30A0A0B4J1P1 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv30A0A0B4J1P1 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv30A0A0B4J1P1 Gm27045-201ENSMUST00000182145 1402 ntBASIC14.85□□□□□ -0.03
Trbv30A0A0B4J1P1 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Trbv30A0A0B4J1P1 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv30A0A0B4J1P1 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Trbv30A0A0B4J1P1 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv30A0A0B4J1P1 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC14.85□□□□□ -0.03
Trbv30A0A0B4J1P1 Gm43137-201ENSMUST00000198052 594 ntBASIC14.85□□□□□ -0.03
Trbv30A0A0B4J1P1 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv30A0A0B4J1P1 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv30A0A0B4J1P1 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv30A0A0B4J1P1 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv30A0A0B4J1P1 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv30A0A0B4J1P1 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv30A0A0B4J1P1 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv30A0A0B4J1P1 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv30A0A0B4J1P1 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv30A0A0B4J1P1 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Trbv30A0A0B4J1P1 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Trbv30A0A0B4J1P1 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trbv30A0A0B4J1P1 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC14.84□□□□□ -0.03
Trbv30A0A0B4J1P1 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv30A0A0B4J1P1 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv30A0A0B4J1P1 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms