Protein–RNA interactions for Protein: A0A0B4J1G7

Trbv1, T cell receptor beta, variable 1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv1A0A0B4J1G7 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Trbv1A0A0B4J1G7 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC15.49■□□□□ 0.07
Trbv1A0A0B4J1G7 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv1A0A0B4J1G7 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv1A0A0B4J1G7 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC15.48■□□□□ 0.07
Trbv1A0A0B4J1G7 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv1A0A0B4J1G7 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Trbv1A0A0B4J1G7 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC15.48■□□□□ 0.07
Trbv1A0A0B4J1G7 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv1A0A0B4J1G7 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Trbv1A0A0B4J1G7 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC15.48■□□□□ 0.07
Trbv1A0A0B4J1G7 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv1A0A0B4J1G7 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv1A0A0B4J1G7 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv1A0A0B4J1G7 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv1A0A0B4J1G7 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
Trbv1A0A0B4J1G7 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC15.48■□□□□ 0.07
Trbv1A0A0B4J1G7 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv1A0A0B4J1G7 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv1A0A0B4J1G7 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Trbv1A0A0B4J1G7 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv1A0A0B4J1G7 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv1A0A0B4J1G7 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC15.47■□□□□ 0.07
Trbv1A0A0B4J1G7 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv1A0A0B4J1G7 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv1A0A0B4J1G7 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv1A0A0B4J1G7 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv1A0A0B4J1G7 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv1A0A0B4J1G7 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv1A0A0B4J1G7 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv1A0A0B4J1G7 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Trbv1A0A0B4J1G7 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC15.46■□□□□ 0.07
Trbv1A0A0B4J1G7 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv1A0A0B4J1G7 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.07
Trbv1A0A0B4J1G7 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC15.46■□□□□ 0.07
Trbv1A0A0B4J1G7 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv1A0A0B4J1G7 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC15.46■□□□□ 0.07
Trbv1A0A0B4J1G7 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv1A0A0B4J1G7 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv1A0A0B4J1G7 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv1A0A0B4J1G7 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trbv1A0A0B4J1G7 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Trbv1A0A0B4J1G7 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv1A0A0B4J1G7 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv1A0A0B4J1G7 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Trbv1A0A0B4J1G7 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv1A0A0B4J1G7 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Trbv1A0A0B4J1G7 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv1A0A0B4J1G7 Gm16464-201ENSMUST00000117815 1095 ntBASIC15.45■□□□□ 0.06
Trbv1A0A0B4J1G7 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv1A0A0B4J1G7 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv1A0A0B4J1G7 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Trbv1A0A0B4J1G7 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv1A0A0B4J1G7 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv1A0A0B4J1G7 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv1A0A0B4J1G7 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Trbv1A0A0B4J1G7 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Trbv1A0A0B4J1G7 Gm5784-201ENSMUST00000179344 2478 ntBASIC15.44■□□□□ 0.06
Trbv1A0A0B4J1G7 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC15.44■□□□□ 0.06
Trbv1A0A0B4J1G7 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv1A0A0B4J1G7 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv1A0A0B4J1G7 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
Trbv1A0A0B4J1G7 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv1A0A0B4J1G7 Gm13238-201ENSMUST00000117655 780 ntBASIC15.44■□□□□ 0.06
Trbv1A0A0B4J1G7 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv1A0A0B4J1G7 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC15.44■□□□□ 0.06
Trbv1A0A0B4J1G7 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC15.44■□□□□ 0.06
Trbv1A0A0B4J1G7 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv1A0A0B4J1G7 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC15.44■□□□□ 0.06
Trbv1A0A0B4J1G7 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC15.44■□□□□ 0.06
Trbv1A0A0B4J1G7 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC15.44■□□□□ 0.06
Trbv1A0A0B4J1G7 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv1A0A0B4J1G7 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv1A0A0B4J1G7 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv1A0A0B4J1G7 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv1A0A0B4J1G7 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC15.43■□□□□ 0.06
Trbv1A0A0B4J1G7 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Trbv1A0A0B4J1G7 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv1A0A0B4J1G7 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv1A0A0B4J1G7 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv1A0A0B4J1G7 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv1A0A0B4J1G7 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv1A0A0B4J1G7 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Trbv1A0A0B4J1G7 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv1A0A0B4J1G7 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Trbv1A0A0B4J1G7 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv1A0A0B4J1G7 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv1A0A0B4J1G7 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv1A0A0B4J1G7 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv1A0A0B4J1G7 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv1A0A0B4J1G7 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv1A0A0B4J1G7 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv1A0A0B4J1G7 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Trbv1A0A0B4J1G7 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv1A0A0B4J1G7 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv1A0A0B4J1G7 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Trbv1A0A0B4J1G7 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv1A0A0B4J1G7 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv1A0A0B4J1G7 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv1A0A0B4J1G7 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms