Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.25■□□□□ 0.51
Trav8n-2A0A075B633 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav8n-2A0A075B633 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav8n-2A0A075B633 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.25■□□□□ 0.51
Trav8n-2A0A075B633 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav8n-2A0A075B633 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav8n-2A0A075B633 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav8n-2A0A075B633 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Trav8n-2A0A075B633 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trav8n-2A0A075B633 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trav8n-2A0A075B633 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav8n-2A0A075B633 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav8n-2A0A075B633 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav8n-2A0A075B633 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav8n-2A0A075B633 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav8n-2A0A075B633 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Trav8n-2A0A075B633 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trav8n-2A0A075B633 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav8n-2A0A075B633 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Trav8n-2A0A075B633 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav8n-2A0A075B633 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.23■□□□□ 0.51
Trav8n-2A0A075B633 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav8n-2A0A075B633 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Trav8n-2A0A075B633 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trav8n-2A0A075B633 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav8n-2A0A075B633 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trav8n-2A0A075B633 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav8n-2A0A075B633 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Trav8n-2A0A075B633 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.22■□□□□ 0.51
Trav8n-2A0A075B633 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.22■□□□□ 0.51
Trav8n-2A0A075B633 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Trav8n-2A0A075B633 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trav8n-2A0A075B633 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav8n-2A0A075B633 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.21■□□□□ 0.51
Trav8n-2A0A075B633 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Trav8n-2A0A075B633 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Trav8n-2A0A075B633 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.21■□□□□ 0.51
Trav8n-2A0A075B633 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trav8n-2A0A075B633 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trav8n-2A0A075B633 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.21■□□□□ 0.51
Trav8n-2A0A075B633 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.21■□□□□ 0.51
Trav8n-2A0A075B633 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Trav8n-2A0A075B633 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav8n-2A0A075B633 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Trav8n-2A0A075B633 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Trav8n-2A0A075B633 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trav8n-2A0A075B633 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav8n-2A0A075B633 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trav8n-2A0A075B633 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav8n-2A0A075B633 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.2■□□□□ 0.5
Trav8n-2A0A075B633 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trav8n-2A0A075B633 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav8n-2A0A075B633 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav8n-2A0A075B633 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav8n-2A0A075B633 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav8n-2A0A075B633 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.2■□□□□ 0.5
Trav8n-2A0A075B633 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav8n-2A0A075B633 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav8n-2A0A075B633 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trav8n-2A0A075B633 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Trav8n-2A0A075B633 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav8n-2A0A075B633 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.19■□□□□ 0.5
Trav8n-2A0A075B633 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav8n-2A0A075B633 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav8n-2A0A075B633 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trav8n-2A0A075B633 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.19■□□□□ 0.5
Trav8n-2A0A075B633 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.19■□□□□ 0.5
Trav8n-2A0A075B633 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav8n-2A0A075B633 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav8n-2A0A075B633 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav8n-2A0A075B633 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trav8n-2A0A075B633 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.18■□□□□ 0.5
Trav8n-2A0A075B633 Mir5133-201ENSMUST00000174955 77 ntBASIC18.18■□□□□ 0.5
Trav8n-2A0A075B633 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav8n-2A0A075B633 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Trav8n-2A0A075B633 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.18■□□□□ 0.5
Trav8n-2A0A075B633 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav8n-2A0A075B633 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav8n-2A0A075B633 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav8n-2A0A075B633 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav8n-2A0A075B633 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav8n-2A0A075B633 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav8n-2A0A075B633 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav8n-2A0A075B633 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trav8n-2A0A075B633 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav8n-2A0A075B633 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav8n-2A0A075B633 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trav8n-2A0A075B633 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav8n-2A0A075B633 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav8n-2A0A075B633 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav8n-2A0A075B633 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav8n-2A0A075B633 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav8n-2A0A075B633 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav8n-2A0A075B633 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav8n-2A0A075B633 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav8n-2A0A075B633 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.16■□□□□ 0.5
Trav8n-2A0A075B633 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trav8n-2A0A075B633 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.16■□□□□ 0.5
Trav8n-2A0A075B633 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav8n-2A0A075B633 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms