Protein–RNA interactions for Protein: Q9Z0M3

Cdh20, Cadherin-20, mousemouse

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh20Q9Z0M3 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdh20Q9Z0M3 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdh20Q9Z0M3 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Cdh20Q9Z0M3 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdh20Q9Z0M3 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.42■□□□□ 0.54
Cdh20Q9Z0M3 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cdh20Q9Z0M3 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdh20Q9Z0M3 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdh20Q9Z0M3 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Cdh20Q9Z0M3 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
Cdh20Q9Z0M3 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Cdh20Q9Z0M3 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cdh20Q9Z0M3 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdh20Q9Z0M3 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdh20Q9Z0M3 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdh20Q9Z0M3 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Cdh20Q9Z0M3 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.41■□□□□ 0.54
Cdh20Q9Z0M3 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cdh20Q9Z0M3 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC18.41■□□□□ 0.54
Cdh20Q9Z0M3 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdh20Q9Z0M3 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdh20Q9Z0M3 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Cdh20Q9Z0M3 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdh20Q9Z0M3 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cdh20Q9Z0M3 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdh20Q9Z0M3 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.4■□□□□ 0.54
Cdh20Q9Z0M3 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cdh20Q9Z0M3 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdh20Q9Z0M3 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdh20Q9Z0M3 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdh20Q9Z0M3 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Cdh20Q9Z0M3 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdh20Q9Z0M3 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdh20Q9Z0M3 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdh20Q9Z0M3 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Cdh20Q9Z0M3 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdh20Q9Z0M3 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdh20Q9Z0M3 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdh20Q9Z0M3 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Cdh20Q9Z0M3 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.39■□□□□ 0.53
Cdh20Q9Z0M3 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.39■□□□□ 0.53
Cdh20Q9Z0M3 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Cdh20Q9Z0M3 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdh20Q9Z0M3 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdh20Q9Z0M3 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Cdh20Q9Z0M3 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdh20Q9Z0M3 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdh20Q9Z0M3 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Cdh20Q9Z0M3 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdh20Q9Z0M3 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Cdh20Q9Z0M3 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cdh20Q9Z0M3 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdh20Q9Z0M3 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdh20Q9Z0M3 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cdh20Q9Z0M3 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdh20Q9Z0M3 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdh20Q9Z0M3 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdh20Q9Z0M3 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cdh20Q9Z0M3 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdh20Q9Z0M3 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdh20Q9Z0M3 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdh20Q9Z0M3 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.37■□□□□ 0.53
Cdh20Q9Z0M3 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdh20Q9Z0M3 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdh20Q9Z0M3 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdh20Q9Z0M3 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdh20Q9Z0M3 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.37■□□□□ 0.53
Cdh20Q9Z0M3 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.37■□□□□ 0.53
Cdh20Q9Z0M3 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Cdh20Q9Z0M3 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdh20Q9Z0M3 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cdh20Q9Z0M3 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdh20Q9Z0M3 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdh20Q9Z0M3 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cdh20Q9Z0M3 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdh20Q9Z0M3 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cdh20Q9Z0M3 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdh20Q9Z0M3 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdh20Q9Z0M3 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.35■□□□□ 0.53
Cdh20Q9Z0M3 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cdh20Q9Z0M3 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdh20Q9Z0M3 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cdh20Q9Z0M3 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cdh20Q9Z0M3 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdh20Q9Z0M3 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cdh20Q9Z0M3 Notumos-201ENSMUST00000151998 2659 ntBASIC18.35■□□□□ 0.53
Cdh20Q9Z0M3 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdh20Q9Z0M3 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Cdh20Q9Z0M3 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdh20Q9Z0M3 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Cdh20Q9Z0M3 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Cdh20Q9Z0M3 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cdh20Q9Z0M3 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.35■□□□□ 0.53
Cdh20Q9Z0M3 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdh20Q9Z0M3 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cdh20Q9Z0M3 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Cdh20Q9Z0M3 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Cdh20Q9Z0M3 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdh20Q9Z0M3 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Cdh20Q9Z0M3 Gm12922-201ENSMUST00000120626 809 ntBASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms