Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.33■□□□□ 0.85
Tubgcp3P58854 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.33■□□□□ 0.85
Tubgcp3P58854 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tubgcp3P58854 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Tubgcp3P58854 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Tubgcp3P58854 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Tubgcp3P58854 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tubgcp3P58854 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tubgcp3P58854 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.32■□□□□ 0.84
Tubgcp3P58854 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tubgcp3P58854 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tubgcp3P58854 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tubgcp3P58854 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tubgcp3P58854 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tubgcp3P58854 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tubgcp3P58854 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tubgcp3P58854 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Tubgcp3P58854 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Tubgcp3P58854 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tubgcp3P58854 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Tubgcp3P58854 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Tubgcp3P58854 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tubgcp3P58854 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Tubgcp3P58854 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tubgcp3P58854 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tubgcp3P58854 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tubgcp3P58854 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.3■□□□□ 0.84
Tubgcp3P58854 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.3■□□□□ 0.84
Tubgcp3P58854 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tubgcp3P58854 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Tubgcp3P58854 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Tubgcp3P58854 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tubgcp3P58854 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.29■□□□□ 0.84
Tubgcp3P58854 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.29■□□□□ 0.84
Tubgcp3P58854 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tubgcp3P58854 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tubgcp3P58854 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tubgcp3P58854 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tubgcp3P58854 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tubgcp3P58854 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Tubgcp3P58854 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
Tubgcp3P58854 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tubgcp3P58854 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tubgcp3P58854 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tubgcp3P58854 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Tubgcp3P58854 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
Tubgcp3P58854 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tubgcp3P58854 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tubgcp3P58854 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tubgcp3P58854 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Tubgcp3P58854 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Tubgcp3P58854 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tubgcp3P58854 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tubgcp3P58854 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tubgcp3P58854 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Tubgcp3P58854 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tubgcp3P58854 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tubgcp3P58854 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tubgcp3P58854 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Tubgcp3P58854 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tubgcp3P58854 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
Tubgcp3P58854 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Tubgcp3P58854 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Tubgcp3P58854 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Tubgcp3P58854 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tubgcp3P58854 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Tubgcp3P58854 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tubgcp3P58854 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.26■□□□□ 0.83
Tubgcp3P58854 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.26■□□□□ 0.83
Tubgcp3P58854 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.26■□□□□ 0.83
Tubgcp3P58854 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tubgcp3P58854 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tubgcp3P58854 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
Tubgcp3P58854 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tubgcp3P58854 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Tubgcp3P58854 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Tubgcp3P58854 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Tubgcp3P58854 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Tubgcp3P58854 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tubgcp3P58854 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tubgcp3P58854 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tubgcp3P58854 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Tubgcp3P58854 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Tubgcp3P58854 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tubgcp3P58854 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tubgcp3P58854 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tubgcp3P58854 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tubgcp3P58854 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tubgcp3P58854 Mir6236-201ENSMUST00000184437 123 ntBASIC20.24■□□□□ 0.83
Tubgcp3P58854 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.24■□□□□ 0.83
Tubgcp3P58854 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Tubgcp3P58854 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tubgcp3P58854 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tubgcp3P58854 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Tubgcp3P58854 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tubgcp3P58854 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Tubgcp3P58854 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tubgcp3P58854 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.23■□□□□ 0.83
Tubgcp3P58854 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Tubgcp3P58854 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms