Protein–RNA interactions for Protein: P55284

Cdh5, Cadherin-5, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh5P55284 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdh5P55284 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.29■□□□□ 0.68
Cdh5P55284 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Cdh5P55284 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdh5P55284 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdh5P55284 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdh5P55284 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdh5P55284 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Cdh5P55284 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdh5P55284 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cdh5P55284 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cdh5P55284 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdh5P55284 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdh5P55284 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdh5P55284 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Cdh5P55284 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Cdh5P55284 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdh5P55284 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdh5P55284 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdh5P55284 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdh5P55284 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.28■□□□□ 0.68
Cdh5P55284 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdh5P55284 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdh5P55284 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cdh5P55284 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cdh5P55284 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.27■□□□□ 0.68
Cdh5P55284 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cdh5P55284 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdh5P55284 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdh5P55284 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdh5P55284 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdh5P55284 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Cdh5P55284 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.27■□□□□ 0.67
Cdh5P55284 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cdh5P55284 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.67
Cdh5P55284 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cdh5P55284 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Cdh5P55284 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.26■□□□□ 0.67
Cdh5P55284 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.26■□□□□ 0.67
Cdh5P55284 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Cdh5P55284 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Cdh5P55284 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdh5P55284 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdh5P55284 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdh5P55284 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdh5P55284 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Cdh5P55284 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdh5P55284 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.25■□□□□ 0.67
Cdh5P55284 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Cdh5P55284 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdh5P55284 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.25■□□□□ 0.67
Cdh5P55284 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.25■□□□□ 0.67
Cdh5P55284 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cdh5P55284 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cdh5P55284 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdh5P55284 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdh5P55284 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdh5P55284 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdh5P55284 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdh5P55284 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Cdh5P55284 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cdh5P55284 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.24■□□□□ 0.67
Cdh5P55284 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Cdh5P55284 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdh5P55284 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.24■□□□□ 0.67
Cdh5P55284 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.24■□□□□ 0.67
Cdh5P55284 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cdh5P55284 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cdh5P55284 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Cdh5P55284 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.23■□□□□ 0.67
Cdh5P55284 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdh5P55284 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdh5P55284 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdh5P55284 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdh5P55284 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cdh5P55284 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cdh5P55284 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdh5P55284 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cdh5P55284 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cdh5P55284 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cdh5P55284 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cdh5P55284 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cdh5P55284 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cdh5P55284 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cdh5P55284 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.22■□□□□ 0.67
Cdh5P55284 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Cdh5P55284 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cdh5P55284 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdh5P55284 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdh5P55284 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdh5P55284 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdh5P55284 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdh5P55284 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdh5P55284 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cdh5P55284 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdh5P55284 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Cdh5P55284 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdh5P55284 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdh5P55284 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdh5P55284 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms