Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Hoxd8P23463 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hoxd8P23463 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hoxd8P23463 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hoxd8P23463 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hoxd8P23463 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
Hoxd8P23463 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hoxd8P23463 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hoxd8P23463 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hoxd8P23463 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Hoxd8P23463 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hoxd8P23463 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Hoxd8P23463 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hoxd8P23463 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hoxd8P23463 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hoxd8P23463 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hoxd8P23463 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC20.8■□□□□ 0.92
Hoxd8P23463 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hoxd8P23463 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Hoxd8P23463 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Hoxd8P23463 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hoxd8P23463 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Hoxd8P23463 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hoxd8P23463 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Hoxd8P23463 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Hoxd8P23463 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Hoxd8P23463 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.79■□□□□ 0.92
Hoxd8P23463 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.79■□□□□ 0.92
Hoxd8P23463 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.79■□□□□ 0.92
Hoxd8P23463 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Hoxd8P23463 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Hoxd8P23463 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hoxd8P23463 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hoxd8P23463 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.79■□□□□ 0.92
Hoxd8P23463 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hoxd8P23463 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hoxd8P23463 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hoxd8P23463 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
Hoxd8P23463 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hoxd8P23463 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Hoxd8P23463 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.78■□□□□ 0.92
Hoxd8P23463 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.78■□□□□ 0.92
Hoxd8P23463 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Hoxd8P23463 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.78■□□□□ 0.92
Hoxd8P23463 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hoxd8P23463 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hoxd8P23463 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Hoxd8P23463 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.78■□□□□ 0.92
Hoxd8P23463 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hoxd8P23463 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hoxd8P23463 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.77■□□□□ 0.92
Hoxd8P23463 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hoxd8P23463 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Hoxd8P23463 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.77■□□□□ 0.92
Hoxd8P23463 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.77■□□□□ 0.92
Hoxd8P23463 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
Hoxd8P23463 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hoxd8P23463 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Hoxd8P23463 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hoxd8P23463 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hoxd8P23463 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Hoxd8P23463 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Hoxd8P23463 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Hoxd8P23463 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.76■□□□□ 0.91
Hoxd8P23463 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Hoxd8P23463 Gm13234-201ENSMUST00000120010 747 ntBASIC20.76■□□□□ 0.91
Hoxd8P23463 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.76■□□□□ 0.91
Hoxd8P23463 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Hoxd8P23463 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hoxd8P23463 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hoxd8P23463 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Hoxd8P23463 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hoxd8P23463 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hoxd8P23463 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hoxd8P23463 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.75■□□□□ 0.91
Hoxd8P23463 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Hoxd8P23463 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hoxd8P23463 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.75■□□□□ 0.91
Hoxd8P23463 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Hoxd8P23463 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Hoxd8P23463 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Hoxd8P23463 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Hoxd8P23463 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.75■□□□□ 0.91
Hoxd8P23463 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Hoxd8P23463 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hoxd8P23463 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hoxd8P23463 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hoxd8P23463 Gm27011-201ENSMUST00000182352 972 ntBASIC20.74■□□□□ 0.91
Hoxd8P23463 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hoxd8P23463 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Hoxd8P23463 Gm9988-201ENSMUST00000069786 435 ntBASIC20.74■□□□□ 0.91
Hoxd8P23463 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hoxd8P23463 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Hoxd8P23463 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hoxd8P23463 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hoxd8P23463 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.73■□□□□ 0.91
Hoxd8P23463 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hoxd8P23463 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
Hoxd8P23463 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hoxd8P23463 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms