Protein–RNA interactions for Protein: P01139

Ngf, Beta-nerve growth factor, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NgfP01139 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.74■□□□□ 0.43
NgfP01139 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NgfP01139 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.74■□□□□ 0.43
NgfP01139 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
NgfP01139 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NgfP01139 Gm9988-201ENSMUST00000069786 435 ntBASIC17.74■□□□□ 0.43
NgfP01139 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NgfP01139 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NgfP01139 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NgfP01139 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.74■□□□□ 0.43
NgfP01139 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.74■□□□□ 0.43
NgfP01139 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NgfP01139 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
NgfP01139 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
NgfP01139 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NgfP01139 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NgfP01139 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NgfP01139 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
NgfP01139 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NgfP01139 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
NgfP01139 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
NgfP01139 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NgfP01139 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NgfP01139 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NgfP01139 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NgfP01139 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.72■□□□□ 0.43
NgfP01139 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.72■□□□□ 0.43
NgfP01139 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NgfP01139 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NgfP01139 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
NgfP01139 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NgfP01139 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NgfP01139 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
NgfP01139 Gm13234-201ENSMUST00000120010 747 ntBASIC17.71■□□□□ 0.43
NgfP01139 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NgfP01139 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.71■□□□□ 0.43
NgfP01139 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
NgfP01139 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.71■□□□□ 0.43
NgfP01139 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NgfP01139 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NgfP01139 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.71■□□□□ 0.42
NgfP01139 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
NgfP01139 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
NgfP01139 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
NgfP01139 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
NgfP01139 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.7■□□□□ 0.42
NgfP01139 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.7■□□□□ 0.42
NgfP01139 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.7■□□□□ 0.42
NgfP01139 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
NgfP01139 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
NgfP01139 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NgfP01139 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
NgfP01139 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC17.7■□□□□ 0.42
NgfP01139 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NgfP01139 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NgfP01139 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NgfP01139 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.69■□□□□ 0.42
NgfP01139 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.69■□□□□ 0.42
NgfP01139 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NgfP01139 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NgfP01139 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NgfP01139 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NgfP01139 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
NgfP01139 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
NgfP01139 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NgfP01139 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NgfP01139 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
NgfP01139 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NgfP01139 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.67■□□□□ 0.42
NgfP01139 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.67■□□□□ 0.42
NgfP01139 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NgfP01139 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.67■□□□□ 0.42
NgfP01139 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
NgfP01139 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NgfP01139 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NgfP01139 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
NgfP01139 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
NgfP01139 Reep4-203ENSMUST00000226563 1444 ntBASIC17.66■□□□□ 0.42
NgfP01139 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NgfP01139 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
NgfP01139 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
NgfP01139 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.66■□□□□ 0.42
NgfP01139 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NgfP01139 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NgfP01139 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NgfP01139 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
NgfP01139 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NgfP01139 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NgfP01139 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
NgfP01139 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NgfP01139 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.65■□□□□ 0.42
NgfP01139 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NgfP01139 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NgfP01139 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NgfP01139 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NgfP01139 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.65■□□□□ 0.42
NgfP01139 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
NgfP01139 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
NgfP01139 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
NgfP01139 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms