Protein–RNA interactions for Protein: A6X942

Sh2d4b, SH2 domain-containing protein 4B, mousemouse

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4bA6X942 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Sh2d4bA6X942 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Sh2d4bA6X942 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
Sh2d4bA6X942 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sh2d4bA6X942 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sh2d4bA6X942 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.26■□□□□ 0.99
Sh2d4bA6X942 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.26■□□□□ 0.99
Sh2d4bA6X942 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Sh2d4bA6X942 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sh2d4bA6X942 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sh2d4bA6X942 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sh2d4bA6X942 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
Sh2d4bA6X942 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sh2d4bA6X942 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sh2d4bA6X942 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.25■□□□□ 0.99
Sh2d4bA6X942 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Sh2d4bA6X942 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sh2d4bA6X942 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sh2d4bA6X942 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sh2d4bA6X942 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sh2d4bA6X942 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sh2d4bA6X942 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC21.25■□□□□ 0.99
Sh2d4bA6X942 Gm27011-201ENSMUST00000182352 972 ntBASIC21.25■□□□□ 0.99
Sh2d4bA6X942 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Sh2d4bA6X942 Spcs1-204ENSMUST00000226782 949 ntBASIC21.25■□□□□ 0.99
Sh2d4bA6X942 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.25■□□□□ 0.99
Sh2d4bA6X942 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Sh2d4bA6X942 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sh2d4bA6X942 Gm6085-201ENSMUST00000182774 1470 ntBASIC21.25■□□□□ 0.99
Sh2d4bA6X942 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sh2d4bA6X942 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Sh2d4bA6X942 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sh2d4bA6X942 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sh2d4bA6X942 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Sh2d4bA6X942 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sh2d4bA6X942 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sh2d4bA6X942 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sh2d4bA6X942 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Sh2d4bA6X942 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Sh2d4bA6X942 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sh2d4bA6X942 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Sh2d4bA6X942 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sh2d4bA6X942 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sh2d4bA6X942 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sh2d4bA6X942 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Sh2d4bA6X942 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sh2d4bA6X942 CT025689.6-201ENSMUST00000224991 1104 ntBASIC21.22■□□□□ 0.99
Sh2d4bA6X942 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Sh2d4bA6X942 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Sh2d4bA6X942 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sh2d4bA6X942 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
Sh2d4bA6X942 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sh2d4bA6X942 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sh2d4bA6X942 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC21.21■□□□□ 0.99
Sh2d4bA6X942 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sh2d4bA6X942 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Sh2d4bA6X942 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sh2d4bA6X942 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sh2d4bA6X942 Gm10129-202ENSMUST00000193100 1316 ntBASIC21.21■□□□□ 0.99
Sh2d4bA6X942 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sh2d4bA6X942 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.21■□□□□ 0.99
Sh2d4bA6X942 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sh2d4bA6X942 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sh2d4bA6X942 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sh2d4bA6X942 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sh2d4bA6X942 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Sh2d4bA6X942 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sh2d4bA6X942 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Sh2d4bA6X942 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sh2d4bA6X942 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sh2d4bA6X942 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sh2d4bA6X942 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC21.2■□□□□ 0.98
Sh2d4bA6X942 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sh2d4bA6X942 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Sh2d4bA6X942 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sh2d4bA6X942 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sh2d4bA6X942 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sh2d4bA6X942 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sh2d4bA6X942 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Sh2d4bA6X942 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sh2d4bA6X942 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sh2d4bA6X942 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sh2d4bA6X942 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Sh2d4bA6X942 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sh2d4bA6X942 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sh2d4bA6X942 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sh2d4bA6X942 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sh2d4bA6X942 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Sh2d4bA6X942 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.18■□□□□ 0.98
Sh2d4bA6X942 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Sh2d4bA6X942 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Sh2d4bA6X942 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Sh2d4bA6X942 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sh2d4bA6X942 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.18■□□□□ 0.98
Sh2d4bA6X942 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Sh2d4bA6X942 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Sh2d4bA6X942 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Sh2d4bA6X942 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC21.18■□□□□ 0.98
Sh2d4bA6X942 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Sh2d4bA6X942 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms