Protein–RNA interactions for Protein: A0A075B642

Trav10, T cell receptor alpha variable 10 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav10A0A075B642 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Trav10A0A075B642 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.67■□□□□ 0.42
Trav10A0A075B642 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav10A0A075B642 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Trav10A0A075B642 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav10A0A075B642 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav10A0A075B642 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav10A0A075B642 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav10A0A075B642 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav10A0A075B642 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trav10A0A075B642 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav10A0A075B642 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav10A0A075B642 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Trav10A0A075B642 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.66■□□□□ 0.42
Trav10A0A075B642 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trav10A0A075B642 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC17.66■□□□□ 0.42
Trav10A0A075B642 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC17.66■□□□□ 0.42
Trav10A0A075B642 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav10A0A075B642 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav10A0A075B642 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Trav10A0A075B642 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC17.66■□□□□ 0.42
Trav10A0A075B642 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Trav10A0A075B642 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav10A0A075B642 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
Trav10A0A075B642 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav10A0A075B642 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Trav10A0A075B642 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav10A0A075B642 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.65■□□□□ 0.42
Trav10A0A075B642 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.65■□□□□ 0.42
Trav10A0A075B642 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav10A0A075B642 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.65■□□□□ 0.42
Trav10A0A075B642 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Trav10A0A075B642 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav10A0A075B642 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trav10A0A075B642 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
Trav10A0A075B642 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Trav10A0A075B642 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.64■□□□□ 0.41
Trav10A0A075B642 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trav10A0A075B642 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav10A0A075B642 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav10A0A075B642 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav10A0A075B642 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav10A0A075B642 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav10A0A075B642 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav10A0A075B642 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav10A0A075B642 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav10A0A075B642 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav10A0A075B642 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav10A0A075B642 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav10A0A075B642 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav10A0A075B642 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav10A0A075B642 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Trav10A0A075B642 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav10A0A075B642 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav10A0A075B642 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav10A0A075B642 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.62■□□□□ 0.41
Trav10A0A075B642 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav10A0A075B642 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav10A0A075B642 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav10A0A075B642 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav10A0A075B642 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.62■□□□□ 0.41
Trav10A0A075B642 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav10A0A075B642 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav10A0A075B642 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav10A0A075B642 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav10A0A075B642 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav10A0A075B642 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav10A0A075B642 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Trav10A0A075B642 Mir6236-201ENSMUST00000184437 123 ntBASIC17.61■□□□□ 0.41
Trav10A0A075B642 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav10A0A075B642 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Trav10A0A075B642 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trav10A0A075B642 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.61■□□□□ 0.41
Trav10A0A075B642 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.6■□□□□ 0.41
Trav10A0A075B642 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav10A0A075B642 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav10A0A075B642 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav10A0A075B642 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav10A0A075B642 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav10A0A075B642 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav10A0A075B642 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav10A0A075B642 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.6■□□□□ 0.41
Trav10A0A075B642 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trav10A0A075B642 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC17.6■□□□□ 0.41
Trav10A0A075B642 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Trav10A0A075B642 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.6■□□□□ 0.41
Trav10A0A075B642 Golgb1-201ENSMUST00000023534 498 ntBASIC17.6■□□□□ 0.41
Trav10A0A075B642 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav10A0A075B642 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav10A0A075B642 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav10A0A075B642 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trav10A0A075B642 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav10A0A075B642 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav10A0A075B642 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Trav10A0A075B642 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trav10A0A075B642 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trav10A0A075B642 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trav10A0A075B642 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.59■□□□□ 0.41
Trav10A0A075B642 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav10A0A075B642 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms