Protein–RNA interactions for Protein: A0A075B642

Trav10, T cell receptor alpha variable 10 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav10A0A075B642 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Trav10A0A075B642 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.67■□□□□ 0.42
Trav10A0A075B642 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav10A0A075B642 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Trav10A0A075B642 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav10A0A075B642 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav10A0A075B642 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav10A0A075B642 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav10A0A075B642 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav10A0A075B642 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trav10A0A075B642 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav10A0A075B642 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav10A0A075B642 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Trav10A0A075B642 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.66■□□□□ 0.42
Trav10A0A075B642 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trav10A0A075B642 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC17.66■□□□□ 0.42
Trav10A0A075B642 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC17.66■□□□□ 0.42
Trav10A0A075B642 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav10A0A075B642 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav10A0A075B642 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Trav10A0A075B642 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC17.66■□□□□ 0.42
Trav10A0A075B642 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Trav10A0A075B642 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav10A0A075B642 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
Trav10A0A075B642 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav10A0A075B642 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Trav10A0A075B642 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav10A0A075B642 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.65■□□□□ 0.42
Trav10A0A075B642 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.65■□□□□ 0.42
Trav10A0A075B642 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav10A0A075B642 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.65■□□□□ 0.42
Trav10A0A075B642 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Trav10A0A075B642 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav10A0A075B642 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trav10A0A075B642 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
Trav10A0A075B642 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Trav10A0A075B642 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.64■□□□□ 0.41
Trav10A0A075B642 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trav10A0A075B642 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav10A0A075B642 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav10A0A075B642 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav10A0A075B642 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav10A0A075B642 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav10A0A075B642 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav10A0A075B642 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav10A0A075B642 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav10A0A075B642 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav10A0A075B642 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav10A0A075B642 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav10A0A075B642 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav10A0A075B642 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav10A0A075B642 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Trav10A0A075B642 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav10A0A075B642 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav10A0A075B642 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav10A0A075B642 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.62■□□□□ 0.41
Trav10A0A075B642 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav10A0A075B642 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav10A0A075B642 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav10A0A075B642 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav10A0A075B642 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.62■□□□□ 0.41
Trav10A0A075B642 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav10A0A075B642 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav10A0A075B642 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav10A0A075B642 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav10A0A075B642 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav10A0A075B642 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav10A0A075B642 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Trav10A0A075B642 Mir6236-201ENSMUST00000184437 123 ntBASIC17.61■□□□□ 0.41
Trav10A0A075B642 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav10A0A075B642 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Trav10A0A075B642 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trav10A0A075B642 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.61■□□□□ 0.41
Trav10A0A075B642 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.6■□□□□ 0.41
Trav10A0A075B642 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav10A0A075B642 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav10A0A075B642 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav10A0A075B642 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav10A0A075B642 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav10A0A075B642 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav10A0A075B642 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav10A0A075B642 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.6■□□□□ 0.41
Trav10A0A075B642 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trav10A0A075B642 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC17.6■□□□□ 0.41
Trav10A0A075B642 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Trav10A0A075B642 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.6■□□□□ 0.41
Trav10A0A075B642 Golgb1-201ENSMUST00000023534 498 ntBASIC17.6■□□□□ 0.41
Trav10A0A075B642 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav10A0A075B642 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav10A0A075B642 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav10A0A075B642 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trav10A0A075B642 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav10A0A075B642 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav10A0A075B642 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Trav10A0A075B642 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trav10A0A075B642 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trav10A0A075B642 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trav10A0A075B642 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.59■□□□□ 0.41
Trav10A0A075B642 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav10A0A075B642 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms