Protein–RNA interactions for Protein: Q9D9H3

Mbd3l1, Methyl-CpG-binding domain protein 3-like 1, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3l1Q9D9H3 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC17.35■□□□□ 0.37
Mbd3l1Q9D9H3 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.35■□□□□ 0.37
Mbd3l1Q9D9H3 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mbd3l1Q9D9H3 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mbd3l1Q9D9H3 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.34■□□□□ 0.37
Mbd3l1Q9D9H3 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Mbd3l1Q9D9H3 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mbd3l1Q9D9H3 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Mbd3l1Q9D9H3 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC17.34■□□□□ 0.37
Mbd3l1Q9D9H3 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mbd3l1Q9D9H3 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Mbd3l1Q9D9H3 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mbd3l1Q9D9H3 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mbd3l1Q9D9H3 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mbd3l1Q9D9H3 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mbd3l1Q9D9H3 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Mbd3l1Q9D9H3 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Mbd3l1Q9D9H3 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.33■□□□□ 0.36
Mbd3l1Q9D9H3 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mbd3l1Q9D9H3 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC17.33■□□□□ 0.36
Mbd3l1Q9D9H3 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Mbd3l1Q9D9H3 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mbd3l1Q9D9H3 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mbd3l1Q9D9H3 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mbd3l1Q9D9H3 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Mbd3l1Q9D9H3 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
Mbd3l1Q9D9H3 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Mbd3l1Q9D9H3 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Mbd3l1Q9D9H3 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Mbd3l1Q9D9H3 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Mbd3l1Q9D9H3 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Mbd3l1Q9D9H3 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mbd3l1Q9D9H3 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mbd3l1Q9D9H3 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mbd3l1Q9D9H3 Grk6-206ENSMUST00000224995 2971 ntBASIC17.32■□□□□ 0.36
Mbd3l1Q9D9H3 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mbd3l1Q9D9H3 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mbd3l1Q9D9H3 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mbd3l1Q9D9H3 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mbd3l1Q9D9H3 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mbd3l1Q9D9H3 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mbd3l1Q9D9H3 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Mbd3l1Q9D9H3 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Mbd3l1Q9D9H3 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mbd3l1Q9D9H3 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mbd3l1Q9D9H3 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mbd3l1Q9D9H3 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Mbd3l1Q9D9H3 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC17.31■□□□□ 0.36
Mbd3l1Q9D9H3 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Mbd3l1Q9D9H3 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mbd3l1Q9D9H3 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Mbd3l1Q9D9H3 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mbd3l1Q9D9H3 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mbd3l1Q9D9H3 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC17.3■□□□□ 0.36
Mbd3l1Q9D9H3 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Mbd3l1Q9D9H3 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mbd3l1Q9D9H3 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mbd3l1Q9D9H3 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Mbd3l1Q9D9H3 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mbd3l1Q9D9H3 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mbd3l1Q9D9H3 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mbd3l1Q9D9H3 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mbd3l1Q9D9H3 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.3■□□□□ 0.36
Mbd3l1Q9D9H3 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mbd3l1Q9D9H3 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC17.3■□□□□ 0.36
Mbd3l1Q9D9H3 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.29■□□□□ 0.36
Mbd3l1Q9D9H3 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Mbd3l1Q9D9H3 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mbd3l1Q9D9H3 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Mbd3l1Q9D9H3 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.29■□□□□ 0.36
Mbd3l1Q9D9H3 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC17.29■□□□□ 0.36
Mbd3l1Q9D9H3 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mbd3l1Q9D9H3 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Mbd3l1Q9D9H3 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mbd3l1Q9D9H3 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.29■□□□□ 0.36
Mbd3l1Q9D9H3 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Mbd3l1Q9D9H3 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.29■□□□□ 0.36
Mbd3l1Q9D9H3 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC17.28■□□□□ 0.36
Mbd3l1Q9D9H3 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
Mbd3l1Q9D9H3 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Mbd3l1Q9D9H3 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mbd3l1Q9D9H3 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
Mbd3l1Q9D9H3 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC17.28■□□□□ 0.36
Mbd3l1Q9D9H3 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mbd3l1Q9D9H3 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Mbd3l1Q9D9H3 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mbd3l1Q9D9H3 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Mbd3l1Q9D9H3 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Mbd3l1Q9D9H3 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Mbd3l1Q9D9H3 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Mbd3l1Q9D9H3 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Mbd3l1Q9D9H3 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC17.27■□□□□ 0.36
Mbd3l1Q9D9H3 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Mbd3l1Q9D9H3 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Mbd3l1Q9D9H3 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Mbd3l1Q9D9H3 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Mbd3l1Q9D9H3 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Mbd3l1Q9D9H3 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
Mbd3l1Q9D9H3 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Mbd3l1Q9D9H3 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms