Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.25■□□□□ 0.51
Ebf4Q8K4J2 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Ebf4Q8K4J2 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.25■□□□□ 0.51
Ebf4Q8K4J2 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ebf4Q8K4J2 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ebf4Q8K4J2 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ebf4Q8K4J2 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ebf4Q8K4J2 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ebf4Q8K4J2 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC18.24■□□□□ 0.51
Ebf4Q8K4J2 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ebf4Q8K4J2 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ebf4Q8K4J2 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ebf4Q8K4J2 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Ebf4Q8K4J2 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC18.23■□□□□ 0.51
Ebf4Q8K4J2 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ebf4Q8K4J2 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ebf4Q8K4J2 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ebf4Q8K4J2 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Ebf4Q8K4J2 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
Ebf4Q8K4J2 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ebf4Q8K4J2 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ebf4Q8K4J2 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Ebf4Q8K4J2 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ebf4Q8K4J2 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ebf4Q8K4J2 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ebf4Q8K4J2 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ebf4Q8K4J2 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.22■□□□□ 0.51
Ebf4Q8K4J2 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ebf4Q8K4J2 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ebf4Q8K4J2 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Ebf4Q8K4J2 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ebf4Q8K4J2 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ebf4Q8K4J2 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.22■□□□□ 0.51
Ebf4Q8K4J2 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Ebf4Q8K4J2 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ebf4Q8K4J2 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC18.21■□□□□ 0.51
Ebf4Q8K4J2 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ebf4Q8K4J2 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.21■□□□□ 0.51
Ebf4Q8K4J2 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Ebf4Q8K4J2 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Ebf4Q8K4J2 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ebf4Q8K4J2 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ebf4Q8K4J2 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Ebf4Q8K4J2 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ebf4Q8K4J2 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ebf4Q8K4J2 Rarb-207ENSMUST00000225921 2756 ntBASIC18.2■□□□□ 0.5
Ebf4Q8K4J2 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ebf4Q8K4J2 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ebf4Q8K4J2 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ebf4Q8K4J2 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ebf4Q8K4J2 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ebf4Q8K4J2 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ebf4Q8K4J2 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ebf4Q8K4J2 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ebf4Q8K4J2 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ebf4Q8K4J2 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ebf4Q8K4J2 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Ebf4Q8K4J2 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.2■□□□□ 0.5
Ebf4Q8K4J2 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ebf4Q8K4J2 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ebf4Q8K4J2 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
Ebf4Q8K4J2 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ebf4Q8K4J2 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC18.19■□□□□ 0.5
Ebf4Q8K4J2 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ebf4Q8K4J2 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ebf4Q8K4J2 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ebf4Q8K4J2 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ebf4Q8K4J2 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ebf4Q8K4J2 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC18.18■□□□□ 0.5
Ebf4Q8K4J2 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
Ebf4Q8K4J2 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ebf4Q8K4J2 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ebf4Q8K4J2 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC18.18■□□□□ 0.5
Ebf4Q8K4J2 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ebf4Q8K4J2 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ebf4Q8K4J2 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ebf4Q8K4J2 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ebf4Q8K4J2 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Ebf4Q8K4J2 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ebf4Q8K4J2 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ebf4Q8K4J2 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Ebf4Q8K4J2 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ebf4Q8K4J2 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ebf4Q8K4J2 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.17■□□□□ 0.5
Ebf4Q8K4J2 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC18.17■□□□□ 0.5
Ebf4Q8K4J2 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ebf4Q8K4J2 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ebf4Q8K4J2 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ebf4Q8K4J2 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ebf4Q8K4J2 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ebf4Q8K4J2 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ebf4Q8K4J2 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ebf4Q8K4J2 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ebf4Q8K4J2 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ebf4Q8K4J2 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ebf4Q8K4J2 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ebf4Q8K4J2 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ebf4Q8K4J2 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ebf4Q8K4J2 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ebf4Q8K4J2 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms