Protein–RNA interactions for Protein: Q8CFL8

Zswim3, Zinc finger SWIM domain-containing protein 3, mousemouse

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zswim3Q8CFL8 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Zswim3Q8CFL8 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Zswim3Q8CFL8 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.14
Zswim3Q8CFL8 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.14
Zswim3Q8CFL8 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.14
Zswim3Q8CFL8 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.14
Zswim3Q8CFL8 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Zswim3Q8CFL8 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
Zswim3Q8CFL8 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC22.14■■□□□ 1.13
Zswim3Q8CFL8 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Zswim3Q8CFL8 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Zswim3Q8CFL8 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Zswim3Q8CFL8 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
Zswim3Q8CFL8 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Zswim3Q8CFL8 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Zswim3Q8CFL8 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.13
Zswim3Q8CFL8 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Zswim3Q8CFL8 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Zswim3Q8CFL8 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC22.12■■□□□ 1.13
Zswim3Q8CFL8 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC22.12■■□□□ 1.13
Zswim3Q8CFL8 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Zswim3Q8CFL8 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC22.12■■□□□ 1.13
Zswim3Q8CFL8 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Zswim3Q8CFL8 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
Zswim3Q8CFL8 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC22.11■■□□□ 1.13
Zswim3Q8CFL8 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC22.11■■□□□ 1.13
Zswim3Q8CFL8 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC22.11■■□□□ 1.13
Zswim3Q8CFL8 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC22.11■■□□□ 1.13
Zswim3Q8CFL8 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Zswim3Q8CFL8 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Zswim3Q8CFL8 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Zswim3Q8CFL8 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Zswim3Q8CFL8 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Zswim3Q8CFL8 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC22.1■■□□□ 1.13
Zswim3Q8CFL8 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Zswim3Q8CFL8 Mir7071-201ENSMUST00000184847 69 ntBASIC22.1■■□□□ 1.13
Zswim3Q8CFL8 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Zswim3Q8CFL8 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Zswim3Q8CFL8 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC22.1■■□□□ 1.13
Zswim3Q8CFL8 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
Zswim3Q8CFL8 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC22.09■■□□□ 1.13
Zswim3Q8CFL8 Gm3807-201ENSMUST00000193520 1168 ntBASIC22.09■■□□□ 1.13
Zswim3Q8CFL8 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Zswim3Q8CFL8 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Zswim3Q8CFL8 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Zswim3Q8CFL8 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Zswim3Q8CFL8 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC22.08■■□□□ 1.13
Zswim3Q8CFL8 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Zswim3Q8CFL8 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Zswim3Q8CFL8 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Zswim3Q8CFL8 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Zswim3Q8CFL8 Gm27801-201ENSMUST00000184174 223 ntBASIC22.08■■□□□ 1.13
Zswim3Q8CFL8 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Zswim3Q8CFL8 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC22.08■■□□□ 1.12
Zswim3Q8CFL8 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.12
Zswim3Q8CFL8 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Zswim3Q8CFL8 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
Zswim3Q8CFL8 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Zswim3Q8CFL8 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC22.07■■□□□ 1.12
Zswim3Q8CFL8 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC22.07■■□□□ 1.12
Zswim3Q8CFL8 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC22.07■■□□□ 1.12
Zswim3Q8CFL8 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
Zswim3Q8CFL8 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Zswim3Q8CFL8 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
Zswim3Q8CFL8 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Zswim3Q8CFL8 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Zswim3Q8CFL8 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Zswim3Q8CFL8 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Zswim3Q8CFL8 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Zswim3Q8CFL8 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Zswim3Q8CFL8 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC22.06■■□□□ 1.12
Zswim3Q8CFL8 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Zswim3Q8CFL8 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
Zswim3Q8CFL8 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Zswim3Q8CFL8 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC22.06■■□□□ 1.12
Zswim3Q8CFL8 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Zswim3Q8CFL8 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Zswim3Q8CFL8 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Zswim3Q8CFL8 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Zswim3Q8CFL8 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Zswim3Q8CFL8 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Zswim3Q8CFL8 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Zswim3Q8CFL8 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Zswim3Q8CFL8 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC22.05■■□□□ 1.12
Zswim3Q8CFL8 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Zswim3Q8CFL8 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Zswim3Q8CFL8 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC22.05■■□□□ 1.12
Zswim3Q8CFL8 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Zswim3Q8CFL8 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Zswim3Q8CFL8 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Zswim3Q8CFL8 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
Zswim3Q8CFL8 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Zswim3Q8CFL8 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Zswim3Q8CFL8 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC22.04■■□□□ 1.12
Zswim3Q8CFL8 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Zswim3Q8CFL8 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Zswim3Q8CFL8 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Zswim3Q8CFL8 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC22.04■■□□□ 1.12
Zswim3Q8CFL8 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Zswim3Q8CFL8 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms