Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Smim4Q8C1Q6 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smim4Q8C1Q6 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smim4Q8C1Q6 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smim4Q8C1Q6 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC16.74■□□□□ 0.27
Smim4Q8C1Q6 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smim4Q8C1Q6 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Smim4Q8C1Q6 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smim4Q8C1Q6 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC16.73■□□□□ 0.27
Smim4Q8C1Q6 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smim4Q8C1Q6 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smim4Q8C1Q6 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smim4Q8C1Q6 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smim4Q8C1Q6 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Smim4Q8C1Q6 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC16.73■□□□□ 0.27
Smim4Q8C1Q6 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Smim4Q8C1Q6 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smim4Q8C1Q6 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smim4Q8C1Q6 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC16.73■□□□□ 0.27
Smim4Q8C1Q6 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Smim4Q8C1Q6 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smim4Q8C1Q6 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smim4Q8C1Q6 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC16.73■□□□□ 0.27
Smim4Q8C1Q6 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smim4Q8C1Q6 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.73■□□□□ 0.27
Smim4Q8C1Q6 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smim4Q8C1Q6 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Smim4Q8C1Q6 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smim4Q8C1Q6 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smim4Q8C1Q6 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smim4Q8C1Q6 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Smim4Q8C1Q6 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC16.72■□□□□ 0.27
Smim4Q8C1Q6 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smim4Q8C1Q6 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
Smim4Q8C1Q6 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Smim4Q8C1Q6 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smim4Q8C1Q6 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smim4Q8C1Q6 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smim4Q8C1Q6 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smim4Q8C1Q6 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Smim4Q8C1Q6 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Smim4Q8C1Q6 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Smim4Q8C1Q6 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC16.71■□□□□ 0.27
Smim4Q8C1Q6 Gm7143-201ENSMUST00000222811 859 ntBASIC16.71■□□□□ 0.27
Smim4Q8C1Q6 Gm40881-201ENSMUST00000223397 166 ntBASIC16.71■□□□□ 0.27
Smim4Q8C1Q6 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Smim4Q8C1Q6 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smim4Q8C1Q6 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Smim4Q8C1Q6 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smim4Q8C1Q6 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smim4Q8C1Q6 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Smim4Q8C1Q6 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Smim4Q8C1Q6 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smim4Q8C1Q6 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smim4Q8C1Q6 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC16.7■□□□□ 0.26
Smim4Q8C1Q6 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smim4Q8C1Q6 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Smim4Q8C1Q6 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smim4Q8C1Q6 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Smim4Q8C1Q6 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smim4Q8C1Q6 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Smim4Q8C1Q6 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smim4Q8C1Q6 AC166356.1-201ENSMUST00000228236 1426 ntBASIC16.7■□□□□ 0.26
Smim4Q8C1Q6 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Smim4Q8C1Q6 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Smim4Q8C1Q6 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC16.69■□□□□ 0.26
Smim4Q8C1Q6 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smim4Q8C1Q6 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smim4Q8C1Q6 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Smim4Q8C1Q6 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC16.69■□□□□ 0.26
Smim4Q8C1Q6 Gm18755-201ENSMUST00000218030 1099 ntBASIC16.69■□□□□ 0.26
Smim4Q8C1Q6 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smim4Q8C1Q6 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smim4Q8C1Q6 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smim4Q8C1Q6 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smim4Q8C1Q6 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Smim4Q8C1Q6 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smim4Q8C1Q6 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smim4Q8C1Q6 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC16.68■□□□□ 0.26
Smim4Q8C1Q6 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smim4Q8C1Q6 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Smim4Q8C1Q6 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Smim4Q8C1Q6 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Smim4Q8C1Q6 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smim4Q8C1Q6 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC16.68■□□□□ 0.26
Smim4Q8C1Q6 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smim4Q8C1Q6 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Smim4Q8C1Q6 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smim4Q8C1Q6 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smim4Q8C1Q6 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smim4Q8C1Q6 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Smim4Q8C1Q6 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smim4Q8C1Q6 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Smim4Q8C1Q6 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Smim4Q8C1Q6 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smim4Q8C1Q6 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.67■□□□□ 0.26
Smim4Q8C1Q6 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Smim4Q8C1Q6 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Smim4Q8C1Q6 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Smim4Q8C1Q6 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms