Protein–RNA interactions for Protein: O35451

Atf6b, Cyclic AMP-dependent transcription factor ATF-6 beta, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6bO35451 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atf6bO35451 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atf6bO35451 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atf6bO35451 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Atf6bO35451 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atf6bO35451 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.28■□□□□ 0.36
Atf6bO35451 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC17.28■□□□□ 0.36
Atf6bO35451 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atf6bO35451 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.28■□□□□ 0.36
Atf6bO35451 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atf6bO35451 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atf6bO35451 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atf6bO35451 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atf6bO35451 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atf6bO35451 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atf6bO35451 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Atf6bO35451 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.27■□□□□ 0.36
Atf6bO35451 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Atf6bO35451 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Atf6bO35451 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Atf6bO35451 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.27■□□□□ 0.35
Atf6bO35451 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Atf6bO35451 Gm21956-201ENSMUST00000179946 522 ntBASIC17.26■□□□□ 0.35
Atf6bO35451 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Atf6bO35451 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.26■□□□□ 0.35
Atf6bO35451 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Atf6bO35451 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.26■□□□□ 0.35
Atf6bO35451 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Atf6bO35451 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Atf6bO35451 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Atf6bO35451 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Atf6bO35451 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Atf6bO35451 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Atf6bO35451 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Atf6bO35451 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Atf6bO35451 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Atf6bO35451 Gm43034-201ENSMUST00000198678 1364 ntBASIC17.25■□□□□ 0.35
Atf6bO35451 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Atf6bO35451 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Atf6bO35451 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atf6bO35451 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC17.24■□□□□ 0.35
Atf6bO35451 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.24■□□□□ 0.35
Atf6bO35451 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atf6bO35451 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atf6bO35451 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC17.24■□□□□ 0.35
Atf6bO35451 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Atf6bO35451 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Atf6bO35451 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Atf6bO35451 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Atf6bO35451 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Atf6bO35451 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Atf6bO35451 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Atf6bO35451 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Atf6bO35451 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Atf6bO35451 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Atf6bO35451 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Atf6bO35451 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Atf6bO35451 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.23■□□□□ 0.35
Atf6bO35451 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atf6bO35451 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Atf6bO35451 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atf6bO35451 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atf6bO35451 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Atf6bO35451 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17.22■□□□□ 0.35
Atf6bO35451 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.22■□□□□ 0.35
Atf6bO35451 AC140930.3-201ENSMUST00000222935 274 ntBASIC17.22■□□□□ 0.35
Atf6bO35451 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atf6bO35451 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Atf6bO35451 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atf6bO35451 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.22■□□□□ 0.35
Atf6bO35451 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Atf6bO35451 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Atf6bO35451 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Atf6bO35451 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Atf6bO35451 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.21■□□□□ 0.35
Atf6bO35451 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Atf6bO35451 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Atf6bO35451 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.21■□□□□ 0.35
Atf6bO35451 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Atf6bO35451 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.21■□□□□ 0.34
Atf6bO35451 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Atf6bO35451 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Atf6bO35451 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Atf6bO35451 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Atf6bO35451 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.2■□□□□ 0.34
Atf6bO35451 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC17.2■□□□□ 0.34
Atf6bO35451 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Atf6bO35451 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Atf6bO35451 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Atf6bO35451 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Atf6bO35451 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Atf6bO35451 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Atf6bO35451 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Atf6bO35451 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Atf6bO35451 Gm43530-201ENSMUST00000195920 274 ntBASIC17.19■□□□□ 0.34
Atf6bO35451 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Atf6bO35451 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Atf6bO35451 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC17.19■□□□□ 0.34
Atf6bO35451 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Atf6bO35451 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms