Protein–RNA interactions for Protein: V9GX31

Gm12728, Peptidyl-prolyl cis-trans isomerase, mousemouse

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12728V9GX31 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gm12728V9GX31 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Gm12728V9GX31 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Gm12728V9GX31 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gm12728V9GX31 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Gm12728V9GX31 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gm12728V9GX31 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC20.66■□□□□ 0.9
Gm12728V9GX31 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Gm12728V9GX31 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Gm12728V9GX31 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Gm12728V9GX31 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Gm12728V9GX31 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gm12728V9GX31 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Gm12728V9GX31 AL845457.1-201ENSMUST00000197244 68 ntBASIC20.62■□□□□ 0.89
Gm12728V9GX31 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gm12728V9GX31 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gm12728V9GX31 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gm12728V9GX31 Mipep-204ENSMUST00000225043 1548 ntBASIC20.6■□□□□ 0.89
Gm12728V9GX31 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.59■□□□□ 0.89
Gm12728V9GX31 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gm12728V9GX31 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Gm12728V9GX31 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Gm12728V9GX31 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm12728V9GX31 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm12728V9GX31 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Gm12728V9GX31 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Gm12728V9GX31 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm12728V9GX31 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gm12728V9GX31 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.51■□□□□ 0.87
Gm12728V9GX31 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm12728V9GX31 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm12728V9GX31 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gm12728V9GX31 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.48■□□□□ 0.87
Gm12728V9GX31 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Gm12728V9GX31 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Gm12728V9GX31 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gm12728V9GX31 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gm12728V9GX31 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Gm12728V9GX31 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gm12728V9GX31 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Gm12728V9GX31 Gm25262-201ENSMUST00000174934 133 ntBASIC20.42■□□□□ 0.86
Gm12728V9GX31 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Gm12728V9GX31 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.41■□□□□ 0.86
Gm12728V9GX31 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gm12728V9GX31 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Gm12728V9GX31 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Gm12728V9GX31 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Gm12728V9GX31 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Gm12728V9GX31 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.37■□□□□ 0.85
Gm12728V9GX31 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Gm12728V9GX31 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm12728V9GX31 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.34■□□□□ 0.85
Gm12728V9GX31 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Gm12728V9GX31 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm12728V9GX31 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gm12728V9GX31 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Gm12728V9GX31 Zxda-201ENSMUST00000117281 2621 ntBASIC20.33■□□□□ 0.84
Gm12728V9GX31 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.32■□□□□ 0.84
Gm12728V9GX31 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm12728V9GX31 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Gm12728V9GX31 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm12728V9GX31 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm12728V9GX31 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
Gm12728V9GX31 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gm12728V9GX31 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm12728V9GX31 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC20.23■□□□□ 0.83
Gm12728V9GX31 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm12728V9GX31 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm12728V9GX31 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm12728V9GX31 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.22■□□□□ 0.83
Gm12728V9GX31 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm12728V9GX31 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm12728V9GX31 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Gm12728V9GX31 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm12728V9GX31 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm12728V9GX31 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC20.18■□□□□ 0.82
Gm12728V9GX31 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm12728V9GX31 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Gm12728V9GX31 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm12728V9GX31 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm12728V9GX31 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Gm12728V9GX31 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC20.15■□□□□ 0.82
Gm12728V9GX31 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm12728V9GX31 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.14■□□□□ 0.81
Gm12728V9GX31 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm12728V9GX31 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Gm12728V9GX31 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Gm12728V9GX31 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Gm12728V9GX31 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm12728V9GX31 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Gm12728V9GX31 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Gm12728V9GX31 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Gm12728V9GX31 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm12728V9GX31 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Gm12728V9GX31 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Gm12728V9GX31 Gm27322-201ENSMUST00000184007 104 ntBASIC20.09■□□□□ 0.81
Gm12728V9GX31 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm12728V9GX31 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Gm12728V9GX31 Amer2-203ENSMUST00000225247 2662 ntBASIC20.08■□□□□ 0.81
Gm12728V9GX31 AC166822.3-201ENSMUST00000227394 661 ntBASIC20.08■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 10.8 ms