Protein–RNA interactions for Protein: S4R1W1

Gm3839, Glyceraldehyde-3-phosphate dehydrogenase, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3839S4R1W1 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Gm3839S4R1W1 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC23.38■■□□□ 1.33
Gm3839S4R1W1 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC23.38■■□□□ 1.33
Gm3839S4R1W1 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Gm3839S4R1W1 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Gm3839S4R1W1 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Gm3839S4R1W1 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC23.32■■□□□ 1.32
Gm3839S4R1W1 Gm24804-201ENSMUST00000174982 85 ntBASIC23.31■■□□□ 1.32
Gm3839S4R1W1 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
Gm3839S4R1W1 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Gm3839S4R1W1 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
Gm3839S4R1W1 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Gm3839S4R1W1 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Gm3839S4R1W1 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
Gm3839S4R1W1 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Gm3839S4R1W1 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Gm3839S4R1W1 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Gm3839S4R1W1 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
Gm3839S4R1W1 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Gm3839S4R1W1 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC23.2■■□□□ 1.3
Gm3839S4R1W1 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Gm3839S4R1W1 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Gm3839S4R1W1 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Gm3839S4R1W1 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Gm3839S4R1W1 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
Gm3839S4R1W1 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC23.15■■□□□ 1.3
Gm3839S4R1W1 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Gm3839S4R1W1 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Gm3839S4R1W1 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC23.12■■□□□ 1.29
Gm3839S4R1W1 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Gm3839S4R1W1 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Gm3839S4R1W1 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Gm3839S4R1W1 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Gm3839S4R1W1 Peli2-204ENSMUST00000226513 1320 ntBASIC23.09■■□□□ 1.29
Gm3839S4R1W1 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Gm3839S4R1W1 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Gm3839S4R1W1 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Gm3839S4R1W1 Gm2415-204ENSMUST00000190235 2004 ntBASIC23.04■■□□□ 1.28
Gm3839S4R1W1 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Gm3839S4R1W1 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
Gm3839S4R1W1 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Gm3839S4R1W1 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Gm3839S4R1W1 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Gm3839S4R1W1 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Gm3839S4R1W1 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
Gm3839S4R1W1 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
Gm3839S4R1W1 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Gm3839S4R1W1 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC23■■□□□ 1.27
Gm3839S4R1W1 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Gm3839S4R1W1 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Gm3839S4R1W1 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC22.97■■□□□ 1.27
Gm3839S4R1W1 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
Gm3839S4R1W1 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Gm3839S4R1W1 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
Gm3839S4R1W1 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Gm3839S4R1W1 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Gm3839S4R1W1 AC153504.1-201ENSMUST00000218379 2290 ntBASIC22.93■■□□□ 1.26
Gm3839S4R1W1 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
Gm3839S4R1W1 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC22.91■■□□□ 1.26
Gm3839S4R1W1 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Gm3839S4R1W1 Gm16148-201ENSMUST00000119653 893 ntBASIC22.9■■□□□ 1.26
Gm3839S4R1W1 Gm6658-202ENSMUST00000209493 1885 ntBASIC22.9■■□□□ 1.26
Gm3839S4R1W1 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Gm3839S4R1W1 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Gm3839S4R1W1 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Gm3839S4R1W1 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Gm3839S4R1W1 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Gm3839S4R1W1 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Gm3839S4R1W1 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.25
Gm3839S4R1W1 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Gm3839S4R1W1 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC22.8■■□□□ 1.24
Gm3839S4R1W1 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Gm3839S4R1W1 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Gm3839S4R1W1 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Gm3839S4R1W1 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Gm3839S4R1W1 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Gm3839S4R1W1 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.24
Gm3839S4R1W1 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC22.76■■□□□ 1.23
Gm3839S4R1W1 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Gm3839S4R1W1 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Gm3839S4R1W1 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
Gm3839S4R1W1 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC22.73■■□□□ 1.23
Gm3839S4R1W1 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Gm3839S4R1W1 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
Gm3839S4R1W1 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC22.72■■□□□ 1.23
Gm3839S4R1W1 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Gm3839S4R1W1 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC22.71■■□□□ 1.23
Gm3839S4R1W1 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Gm3839S4R1W1 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Gm3839S4R1W1 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Gm3839S4R1W1 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Gm3839S4R1W1 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Gm3839S4R1W1 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC22.67■■□□□ 1.22
Gm3839S4R1W1 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Gm3839S4R1W1 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Gm3839S4R1W1 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Gm3839S4R1W1 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
Gm3839S4R1W1 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
Gm3839S4R1W1 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Gm3839S4R1W1 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms