Protein–RNA interactions for Protein: Q9WTV7

Rlim, E3 ubiquitin-protein ligase RLIM, mousemouse

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RlimQ9WTV7 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
RlimQ9WTV7 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RlimQ9WTV7 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
RlimQ9WTV7 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC23.68■■□□□ 1.38
RlimQ9WTV7 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
RlimQ9WTV7 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
RlimQ9WTV7 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC23.66■■□□□ 1.38
RlimQ9WTV7 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC23.65■■□□□ 1.38
RlimQ9WTV7 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
RlimQ9WTV7 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
RlimQ9WTV7 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
RlimQ9WTV7 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
RlimQ9WTV7 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RlimQ9WTV7 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
RlimQ9WTV7 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
RlimQ9WTV7 Gm17082-201ENSMUST00000166043 1091 ntBASIC23.57■■□□□ 1.36
RlimQ9WTV7 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
RlimQ9WTV7 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
RlimQ9WTV7 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC23.55■■□□□ 1.36
RlimQ9WTV7 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC23.55■■□□□ 1.36
RlimQ9WTV7 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
RlimQ9WTV7 Gm27322-201ENSMUST00000184007 104 ntBASIC23.54■■□□□ 1.36
RlimQ9WTV7 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RlimQ9WTV7 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
RlimQ9WTV7 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RlimQ9WTV7 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RlimQ9WTV7 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
RlimQ9WTV7 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
RlimQ9WTV7 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC23.51■■□□□ 1.35
RlimQ9WTV7 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC23.5■■□□□ 1.35
RlimQ9WTV7 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC23.49■■□□□ 1.35
RlimQ9WTV7 AC166822.3-201ENSMUST00000227394 661 ntBASIC23.49■■□□□ 1.35
RlimQ9WTV7 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
RlimQ9WTV7 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
RlimQ9WTV7 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
RlimQ9WTV7 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
RlimQ9WTV7 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
RlimQ9WTV7 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC23.45■■□□□ 1.34
RlimQ9WTV7 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC23.44■■□□□ 1.34
RlimQ9WTV7 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
RlimQ9WTV7 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
RlimQ9WTV7 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
RlimQ9WTV7 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
RlimQ9WTV7 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23.41■■□□□ 1.34
RlimQ9WTV7 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RlimQ9WTV7 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
RlimQ9WTV7 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
RlimQ9WTV7 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RlimQ9WTV7 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RlimQ9WTV7 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
RlimQ9WTV7 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
RlimQ9WTV7 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RlimQ9WTV7 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RlimQ9WTV7 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RlimQ9WTV7 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
RlimQ9WTV7 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RlimQ9WTV7 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RlimQ9WTV7 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RlimQ9WTV7 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RlimQ9WTV7 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RlimQ9WTV7 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
RlimQ9WTV7 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RlimQ9WTV7 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
RlimQ9WTV7 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RlimQ9WTV7 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
RlimQ9WTV7 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
RlimQ9WTV7 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
RlimQ9WTV7 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
RlimQ9WTV7 Gm26115-201ENSMUST00000175605 87 ntBASIC23.22■■□□□ 1.31
RlimQ9WTV7 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
RlimQ9WTV7 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC23.2■■□□□ 1.3
RlimQ9WTV7 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RlimQ9WTV7 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
RlimQ9WTV7 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
RlimQ9WTV7 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
RlimQ9WTV7 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RlimQ9WTV7 Gm8109-201ENSMUST00000194076 746 ntBASIC23.17■■□□□ 1.3
RlimQ9WTV7 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
RlimQ9WTV7 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
RlimQ9WTV7 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RlimQ9WTV7 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
RlimQ9WTV7 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
RlimQ9WTV7 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RlimQ9WTV7 Zxda-201ENSMUST00000117281 2621 ntBASIC23.12■■□□□ 1.29
RlimQ9WTV7 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RlimQ9WTV7 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
RlimQ9WTV7 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RlimQ9WTV7 Gm9905-201ENSMUST00000065740 1845 ntBASIC23.09■■□□□ 1.29
RlimQ9WTV7 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
RlimQ9WTV7 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
RlimQ9WTV7 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC23.08■■□□□ 1.29
RlimQ9WTV7 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
RlimQ9WTV7 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC23.08■■□□□ 1.29
RlimQ9WTV7 Gm6206-201ENSMUST00000133472 2199 ntBASIC23.07■■□□□ 1.28
RlimQ9WTV7 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC23.06■■□□□ 1.28
RlimQ9WTV7 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RlimQ9WTV7 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
RlimQ9WTV7 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC23.03■■□□□ 1.28
RlimQ9WTV7 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
RlimQ9WTV7 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC23.02■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms