Protein–RNA interactions for Protein: Q9CQU3

Rer1, Protein RER1, mousemouse

Known RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rer1Q9CQU3 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rer1Q9CQU3 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Rer1Q9CQU3 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21.18■□□□□ 0.98
Rer1Q9CQU3 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rer1Q9CQU3 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rer1Q9CQU3 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Rer1Q9CQU3 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21.15■□□□□ 0.98
Rer1Q9CQU3 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rer1Q9CQU3 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Rer1Q9CQU3 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rer1Q9CQU3 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC21.13■□□□□ 0.97
Rer1Q9CQU3 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Rer1Q9CQU3 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC21.11■□□□□ 0.97
Rer1Q9CQU3 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Rer1Q9CQU3 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Rer1Q9CQU3 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Rer1Q9CQU3 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rer1Q9CQU3 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rer1Q9CQU3 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Rer1Q9CQU3 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rer1Q9CQU3 Gm17082-201ENSMUST00000166043 1091 ntBASIC21.05■□□□□ 0.96
Rer1Q9CQU3 Gm27322-201ENSMUST00000184007 104 ntBASIC21.04■□□□□ 0.96
Rer1Q9CQU3 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Rer1Q9CQU3 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Rer1Q9CQU3 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rer1Q9CQU3 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC21.02■□□□□ 0.96
Rer1Q9CQU3 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rer1Q9CQU3 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC21.02■□□□□ 0.96
Rer1Q9CQU3 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rer1Q9CQU3 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Rer1Q9CQU3 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Rer1Q9CQU3 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rer1Q9CQU3 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC20.99■□□□□ 0.95
Rer1Q9CQU3 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
Rer1Q9CQU3 AC166822.3-201ENSMUST00000227394 661 ntBASIC20.98■□□□□ 0.95
Rer1Q9CQU3 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC20.98■□□□□ 0.95
Rer1Q9CQU3 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rer1Q9CQU3 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rer1Q9CQU3 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rer1Q9CQU3 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rer1Q9CQU3 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.94■□□□□ 0.94
Rer1Q9CQU3 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
Rer1Q9CQU3 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rer1Q9CQU3 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rer1Q9CQU3 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rer1Q9CQU3 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rer1Q9CQU3 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Rer1Q9CQU3 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Rer1Q9CQU3 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rer1Q9CQU3 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Rer1Q9CQU3 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rer1Q9CQU3 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Rer1Q9CQU3 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rer1Q9CQU3 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rer1Q9CQU3 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rer1Q9CQU3 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rer1Q9CQU3 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rer1Q9CQU3 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rer1Q9CQU3 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rer1Q9CQU3 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rer1Q9CQU3 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rer1Q9CQU3 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rer1Q9CQU3 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rer1Q9CQU3 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rer1Q9CQU3 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rer1Q9CQU3 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rer1Q9CQU3 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rer1Q9CQU3 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Rer1Q9CQU3 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Rer1Q9CQU3 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Rer1Q9CQU3 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rer1Q9CQU3 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rer1Q9CQU3 Gm26115-201ENSMUST00000175605 87 ntBASIC20.74■□□□□ 0.91
Rer1Q9CQU3 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Rer1Q9CQU3 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Rer1Q9CQU3 Gm8109-201ENSMUST00000194076 746 ntBASIC20.72■□□□□ 0.91
Rer1Q9CQU3 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rer1Q9CQU3 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.71■□□□□ 0.91
Rer1Q9CQU3 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rer1Q9CQU3 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rer1Q9CQU3 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rer1Q9CQU3 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rer1Q9CQU3 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Rer1Q9CQU3 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Rer1Q9CQU3 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rer1Q9CQU3 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rer1Q9CQU3 Zxda-201ENSMUST00000117281 2621 ntBASIC20.64■□□□□ 0.9
Rer1Q9CQU3 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rer1Q9CQU3 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rer1Q9CQU3 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Rer1Q9CQU3 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rer1Q9CQU3 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.62■□□□□ 0.89
Rer1Q9CQU3 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.62■□□□□ 0.89
Rer1Q9CQU3 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rer1Q9CQU3 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rer1Q9CQU3 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC20.61■□□□□ 0.89
Rer1Q9CQU3 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rer1Q9CQU3 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rer1Q9CQU3 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rer1Q9CQU3 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms