Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC21.32■■□□□ 1
H2afb1Q9CQ70 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
H2afb1Q9CQ70 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC21.31■■□□□ 1
H2afb1Q9CQ70 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21.3■■□□□ 1
H2afb1Q9CQ70 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
H2afb1Q9CQ70 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21.29■■□□□ 1
H2afb1Q9CQ70 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC21.28■■□□□ 1
H2afb1Q9CQ70 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
H2afb1Q9CQ70 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
H2afb1Q9CQ70 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
H2afb1Q9CQ70 Gm17082-201ENSMUST00000166043 1091 ntBASIC21.22■□□□□ 0.99
H2afb1Q9CQ70 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
H2afb1Q9CQ70 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
H2afb1Q9CQ70 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21.2■□□□□ 0.99
H2afb1Q9CQ70 Gm27322-201ENSMUST00000184007 104 ntBASIC21.2■□□□□ 0.98
H2afb1Q9CQ70 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC21.2■□□□□ 0.98
H2afb1Q9CQ70 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
H2afb1Q9CQ70 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC21.19■□□□□ 0.98
H2afb1Q9CQ70 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
H2afb1Q9CQ70 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
H2afb1Q9CQ70 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
H2afb1Q9CQ70 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
H2afb1Q9CQ70 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
H2afb1Q9CQ70 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
H2afb1Q9CQ70 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
H2afb1Q9CQ70 AC166822.3-201ENSMUST00000227394 661 ntBASIC21.17■□□□□ 0.98
H2afb1Q9CQ70 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC21.17■□□□□ 0.98
H2afb1Q9CQ70 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
H2afb1Q9CQ70 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
H2afb1Q9CQ70 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
H2afb1Q9CQ70 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
H2afb1Q9CQ70 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
H2afb1Q9CQ70 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
H2afb1Q9CQ70 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
H2afb1Q9CQ70 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
H2afb1Q9CQ70 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.13■□□□□ 0.97
H2afb1Q9CQ70 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC21.13■□□□□ 0.97
H2afb1Q9CQ70 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
H2afb1Q9CQ70 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
H2afb1Q9CQ70 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
H2afb1Q9CQ70 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
H2afb1Q9CQ70 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
H2afb1Q9CQ70 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
H2afb1Q9CQ70 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
H2afb1Q9CQ70 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
H2afb1Q9CQ70 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
H2afb1Q9CQ70 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
H2afb1Q9CQ70 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
H2afb1Q9CQ70 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
H2afb1Q9CQ70 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
H2afb1Q9CQ70 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
H2afb1Q9CQ70 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
H2afb1Q9CQ70 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
H2afb1Q9CQ70 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
H2afb1Q9CQ70 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
H2afb1Q9CQ70 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
H2afb1Q9CQ70 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
H2afb1Q9CQ70 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
H2afb1Q9CQ70 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
H2afb1Q9CQ70 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
H2afb1Q9CQ70 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
H2afb1Q9CQ70 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
H2afb1Q9CQ70 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
H2afb1Q9CQ70 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
H2afb1Q9CQ70 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
H2afb1Q9CQ70 Gm26115-201ENSMUST00000175605 87 ntBASIC20.9■□□□□ 0.94
H2afb1Q9CQ70 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
H2afb1Q9CQ70 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
H2afb1Q9CQ70 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
H2afb1Q9CQ70 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
H2afb1Q9CQ70 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
H2afb1Q9CQ70 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
H2afb1Q9CQ70 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
H2afb1Q9CQ70 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
H2afb1Q9CQ70 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
H2afb1Q9CQ70 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC20.85■□□□□ 0.93
H2afb1Q9CQ70 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
H2afb1Q9CQ70 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
H2afb1Q9CQ70 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
H2afb1Q9CQ70 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
H2afb1Q9CQ70 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
H2afb1Q9CQ70 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
H2afb1Q9CQ70 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.82■□□□□ 0.92
H2afb1Q9CQ70 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
H2afb1Q9CQ70 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
H2afb1Q9CQ70 Gm8109-201ENSMUST00000194076 746 ntBASIC20.81■□□□□ 0.92
H2afb1Q9CQ70 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
H2afb1Q9CQ70 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
H2afb1Q9CQ70 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.79■□□□□ 0.92
H2afb1Q9CQ70 Zxda-201ENSMUST00000117281 2621 ntBASIC20.79■□□□□ 0.92
H2afb1Q9CQ70 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC20.78■□□□□ 0.92
H2afb1Q9CQ70 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
H2afb1Q9CQ70 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC20.77■□□□□ 0.92
H2afb1Q9CQ70 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
H2afb1Q9CQ70 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
H2afb1Q9CQ70 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC20.75■□□□□ 0.91
H2afb1Q9CQ70 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
H2afb1Q9CQ70 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
H2afb1Q9CQ70 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
H2afb1Q9CQ70 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms