Protein–RNA interactions for Protein: Q9CPV3

Mrpl42, 39S ribosomal protein L42, mitochondrial, mousemouse

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl42Q9CPV3 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Mrpl42Q9CPV3 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Mrpl42Q9CPV3 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.03
Mrpl42Q9CPV3 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Mrpl42Q9CPV3 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Mrpl42Q9CPV3 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC21.49■■□□□ 1.03
Mrpl42Q9CPV3 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Mrpl42Q9CPV3 AC166822.3-201ENSMUST00000227394 661 ntBASIC21.45■■□□□ 1.02
Mrpl42Q9CPV3 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC21.44■■□□□ 1.02
Mrpl42Q9CPV3 Gm6658-202ENSMUST00000209493 1885 ntBASIC21.43■■□□□ 1.02
Mrpl42Q9CPV3 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Mrpl42Q9CPV3 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Mrpl42Q9CPV3 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Mrpl42Q9CPV3 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21.41■■□□□ 1.02
Mrpl42Q9CPV3 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Mrpl42Q9CPV3 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Mrpl42Q9CPV3 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Mrpl42Q9CPV3 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Mrpl42Q9CPV3 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Mrpl42Q9CPV3 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Mrpl42Q9CPV3 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Mrpl42Q9CPV3 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC21.32■■□□□ 1
Mrpl42Q9CPV3 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Mrpl42Q9CPV3 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC21.3■■□□□ 1
Mrpl42Q9CPV3 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Mrpl42Q9CPV3 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Mrpl42Q9CPV3 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC21.27■■□□□ 1
Mrpl42Q9CPV3 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Mrpl42Q9CPV3 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Mrpl42Q9CPV3 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Mrpl42Q9CPV3 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Mrpl42Q9CPV3 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Mrpl42Q9CPV3 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC21.24■□□□□ 0.99
Mrpl42Q9CPV3 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Mrpl42Q9CPV3 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Mrpl42Q9CPV3 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Mrpl42Q9CPV3 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Mrpl42Q9CPV3 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Mrpl42Q9CPV3 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Mrpl42Q9CPV3 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Mrpl42Q9CPV3 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21.19■□□□□ 0.98
Mrpl42Q9CPV3 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Mrpl42Q9CPV3 Gm24804-201ENSMUST00000174982 85 ntBASIC21.18■□□□□ 0.98
Mrpl42Q9CPV3 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Mrpl42Q9CPV3 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Mrpl42Q9CPV3 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Mrpl42Q9CPV3 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Mrpl42Q9CPV3 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Mrpl42Q9CPV3 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Mrpl42Q9CPV3 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Mrpl42Q9CPV3 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21.13■□□□□ 0.97
Mrpl42Q9CPV3 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Mrpl42Q9CPV3 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Mrpl42Q9CPV3 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
Mrpl42Q9CPV3 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Mrpl42Q9CPV3 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Mrpl42Q9CPV3 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.11■□□□□ 0.97
Mrpl42Q9CPV3 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Mrpl42Q9CPV3 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Mrpl42Q9CPV3 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC21.08■□□□□ 0.97
Mrpl42Q9CPV3 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Mrpl42Q9CPV3 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Mrpl42Q9CPV3 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Mrpl42Q9CPV3 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Mrpl42Q9CPV3 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Mrpl42Q9CPV3 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Mrpl42Q9CPV3 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Mrpl42Q9CPV3 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Mrpl42Q9CPV3 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
Mrpl42Q9CPV3 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Mrpl42Q9CPV3 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Mrpl42Q9CPV3 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Mrpl42Q9CPV3 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
Mrpl42Q9CPV3 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC21■□□□□ 0.95
Mrpl42Q9CPV3 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Mrpl42Q9CPV3 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC21■□□□□ 0.95
Mrpl42Q9CPV3 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Mrpl42Q9CPV3 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Mrpl42Q9CPV3 Peli2-204ENSMUST00000226513 1320 ntBASIC20.99■□□□□ 0.95
Mrpl42Q9CPV3 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Mrpl42Q9CPV3 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Mrpl42Q9CPV3 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC20.97■□□□□ 0.95
Mrpl42Q9CPV3 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Mrpl42Q9CPV3 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Mrpl42Q9CPV3 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Mrpl42Q9CPV3 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Mrpl42Q9CPV3 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Mrpl42Q9CPV3 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Mrpl42Q9CPV3 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Mrpl42Q9CPV3 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.94■□□□□ 0.94
Mrpl42Q9CPV3 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Mrpl42Q9CPV3 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Mrpl42Q9CPV3 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Mrpl42Q9CPV3 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Mrpl42Q9CPV3 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Mrpl42Q9CPV3 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC20.91■□□□□ 0.94
Mrpl42Q9CPV3 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Mrpl42Q9CPV3 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Mrpl42Q9CPV3 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC20.89■□□□□ 0.93
Mrpl42Q9CPV3 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC20.87■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms