Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC25.09■■□□□ 1.61
Trim16Q99PP9 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Trim16Q99PP9 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Trim16Q99PP9 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Trim16Q99PP9 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
Trim16Q99PP9 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Trim16Q99PP9 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Trim16Q99PP9 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Trim16Q99PP9 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Trim16Q99PP9 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Trim16Q99PP9 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC24.99■■□□□ 1.59
Trim16Q99PP9 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Trim16Q99PP9 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Trim16Q99PP9 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Trim16Q99PP9 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Trim16Q99PP9 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
Trim16Q99PP9 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Trim16Q99PP9 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC24.93■■□□□ 1.58
Trim16Q99PP9 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC24.91■■□□□ 1.58
Trim16Q99PP9 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Trim16Q99PP9 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Trim16Q99PP9 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC24.89■■□□□ 1.57
Trim16Q99PP9 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Trim16Q99PP9 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC24.86■■□□□ 1.57
Trim16Q99PP9 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Trim16Q99PP9 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Trim16Q99PP9 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Trim16Q99PP9 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC24.82■■□□□ 1.56
Trim16Q99PP9 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Trim16Q99PP9 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Trim16Q99PP9 Gm24804-201ENSMUST00000174982 85 ntBASIC24.8■■□□□ 1.56
Trim16Q99PP9 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Trim16Q99PP9 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Trim16Q99PP9 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC24.78■■□□□ 1.56
Trim16Q99PP9 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Trim16Q99PP9 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC24.77■■□□□ 1.56
Trim16Q99PP9 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Trim16Q99PP9 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Trim16Q99PP9 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Trim16Q99PP9 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC24.71■■□□□ 1.55
Trim16Q99PP9 Gm2415-204ENSMUST00000190235 2004 ntBASIC24.7■■□□□ 1.54
Trim16Q99PP9 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
Trim16Q99PP9 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Trim16Q99PP9 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Trim16Q99PP9 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC24.66■■□□□ 1.54
Trim16Q99PP9 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Trim16Q99PP9 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Trim16Q99PP9 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
Trim16Q99PP9 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC24.63■■□□□ 1.53
Trim16Q99PP9 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Trim16Q99PP9 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
Trim16Q99PP9 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Trim16Q99PP9 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Trim16Q99PP9 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Trim16Q99PP9 Peli2-204ENSMUST00000226513 1320 ntBASIC24.61■■□□□ 1.53
Trim16Q99PP9 AC153504.1-201ENSMUST00000218379 2290 ntBASIC24.6■■□□□ 1.53
Trim16Q99PP9 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Trim16Q99PP9 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Trim16Q99PP9 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Trim16Q99PP9 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Trim16Q99PP9 Zxda-201ENSMUST00000117281 2621 ntBASIC24.59■■□□□ 1.53
Trim16Q99PP9 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Trim16Q99PP9 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC24.58■■□□□ 1.53
Trim16Q99PP9 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Trim16Q99PP9 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
Trim16Q99PP9 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Trim16Q99PP9 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Trim16Q99PP9 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC24.55■■□□□ 1.52
Trim16Q99PP9 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Trim16Q99PP9 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC24.53■■□□□ 1.52
Trim16Q99PP9 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
Trim16Q99PP9 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Trim16Q99PP9 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Trim16Q99PP9 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC24.5■■□□□ 1.51
Trim16Q99PP9 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Trim16Q99PP9 Gm6658-202ENSMUST00000209493 1885 ntBASIC24.5■■□□□ 1.51
Trim16Q99PP9 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Trim16Q99PP9 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Trim16Q99PP9 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
Trim16Q99PP9 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Trim16Q99PP9 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
Trim16Q99PP9 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Trim16Q99PP9 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
Trim16Q99PP9 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Trim16Q99PP9 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Trim16Q99PP9 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
Trim16Q99PP9 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
Trim16Q99PP9 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Trim16Q99PP9 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Trim16Q99PP9 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Trim16Q99PP9 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Trim16Q99PP9 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Trim16Q99PP9 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Trim16Q99PP9 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Trim16Q99PP9 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC24.33■■□□□ 1.48
Trim16Q99PP9 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
Trim16Q99PP9 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Trim16Q99PP9 Gm16148-201ENSMUST00000119653 893 ntBASIC24.31■■□□□ 1.48
Trim16Q99PP9 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Trim16Q99PP9 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms