Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC25.68■■□□□ 1.7
Trim33Q99PP7 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC25.66■■□□□ 1.7
Trim33Q99PP7 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Trim33Q99PP7 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Trim33Q99PP7 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Trim33Q99PP7 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC25.61■■□□□ 1.69
Trim33Q99PP7 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC25.61■■□□□ 1.69
Trim33Q99PP7 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Trim33Q99PP7 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC25.58■■□□□ 1.68
Trim33Q99PP7 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Trim33Q99PP7 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC25.57■■□□□ 1.68
Trim33Q99PP7 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Trim33Q99PP7 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Trim33Q99PP7 Gm24804-201ENSMUST00000174982 85 ntBASIC25.54■■□□□ 1.68
Trim33Q99PP7 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Trim33Q99PP7 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
Trim33Q99PP7 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC25.49■■□□□ 1.67
Trim33Q99PP7 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Trim33Q99PP7 Gm2415-204ENSMUST00000190235 2004 ntBASIC25.47■■□□□ 1.67
Trim33Q99PP7 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC25.47■■□□□ 1.67
Trim33Q99PP7 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Trim33Q99PP7 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Trim33Q99PP7 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Trim33Q99PP7 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Trim33Q99PP7 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC25.42■■□□□ 1.66
Trim33Q99PP7 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Trim33Q99PP7 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Trim33Q99PP7 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Trim33Q99PP7 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Trim33Q99PP7 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Trim33Q99PP7 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
Trim33Q99PP7 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
Trim33Q99PP7 Peli2-204ENSMUST00000226513 1320 ntBASIC25.37■■□□□ 1.65
Trim33Q99PP7 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Trim33Q99PP7 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Trim33Q99PP7 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Trim33Q99PP7 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Trim33Q99PP7 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC25.34■■□□□ 1.65
Trim33Q99PP7 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
Trim33Q99PP7 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.65
Trim33Q99PP7 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Trim33Q99PP7 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
Trim33Q99PP7 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC25.33■■□□□ 1.65
Trim33Q99PP7 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Trim33Q99PP7 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
Trim33Q99PP7 Gm6658-202ENSMUST00000209493 1885 ntBASIC25.29■■□□□ 1.64
Trim33Q99PP7 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Trim33Q99PP7 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC25.27■■□□□ 1.64
Trim33Q99PP7 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Trim33Q99PP7 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC25.26■■□□□ 1.63
Trim33Q99PP7 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Trim33Q99PP7 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Trim33Q99PP7 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
Trim33Q99PP7 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Trim33Q99PP7 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC25.21■■□□□ 1.63
Trim33Q99PP7 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
Trim33Q99PP7 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.62
Trim33Q99PP7 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC25.18■■□□□ 1.62
Trim33Q99PP7 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Trim33Q99PP7 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
Trim33Q99PP7 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Trim33Q99PP7 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Trim33Q99PP7 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.62
Trim33Q99PP7 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Trim33Q99PP7 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.61
Trim33Q99PP7 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
Trim33Q99PP7 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC25.12■■□□□ 1.61
Trim33Q99PP7 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Trim33Q99PP7 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Trim33Q99PP7 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
Trim33Q99PP7 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Trim33Q99PP7 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Trim33Q99PP7 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Trim33Q99PP7 Gm16148-201ENSMUST00000119653 893 ntBASIC25.07■■□□□ 1.6
Trim33Q99PP7 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Trim33Q99PP7 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Trim33Q99PP7 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC25.03■■□□□ 1.6
Trim33Q99PP7 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.6
Trim33Q99PP7 Zxda-201ENSMUST00000117281 2621 ntBASIC25.02■■□□□ 1.6
Trim33Q99PP7 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Trim33Q99PP7 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Trim33Q99PP7 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Trim33Q99PP7 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC25■■□□□ 1.59
Trim33Q99PP7 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
Trim33Q99PP7 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC25■■□□□ 1.59
Trim33Q99PP7 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC24.99■■□□□ 1.59
Trim33Q99PP7 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Trim33Q99PP7 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Trim33Q99PP7 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC24.97■■□□□ 1.59
Trim33Q99PP7 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Trim33Q99PP7 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC24.95■■□□□ 1.58
Trim33Q99PP7 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Trim33Q99PP7 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Trim33Q99PP7 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
Trim33Q99PP7 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Trim33Q99PP7 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC24.91■■□□□ 1.58
Trim33Q99PP7 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Trim33Q99PP7 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Trim33Q99PP7 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Trim33Q99PP7 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms