Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
Rtn4Q99P72 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC32.85■■■□□ 2.85
Rtn4Q99P72 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC32.85■■■□□ 2.85
Rtn4Q99P72 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC32.83■■■□□ 2.85
Rtn4Q99P72 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
Rtn4Q99P72 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC32.81■■■□□ 2.84
Rtn4Q99P72 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC32.8■■■□□ 2.84
Rtn4Q99P72 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
Rtn4Q99P72 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
Rtn4Q99P72 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
Rtn4Q99P72 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC32.77■■■□□ 2.84
Rtn4Q99P72 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
Rtn4Q99P72 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC32.76■■■□□ 2.83
Rtn4Q99P72 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC32.75■■■□□ 2.83
Rtn4Q99P72 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
Rtn4Q99P72 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
Rtn4Q99P72 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC32.7■■■□□ 2.83
Rtn4Q99P72 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
Rtn4Q99P72 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC32.69■■■□□ 2.82
Rtn4Q99P72 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
Rtn4Q99P72 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
Rtn4Q99P72 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC32.64■■■□□ 2.82
Rtn4Q99P72 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC32.63■■■□□ 2.81
Rtn4Q99P72 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
Rtn4Q99P72 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC32.61■■■□□ 2.81
Rtn4Q99P72 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
Rtn4Q99P72 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
Rtn4Q99P72 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
Rtn4Q99P72 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
Rtn4Q99P72 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC32.56■■■□□ 2.8
Rtn4Q99P72 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
Rtn4Q99P72 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC32.54■■■□□ 2.8
Rtn4Q99P72 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC32.53■■■□□ 2.8
Rtn4Q99P72 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC32.51■■■□□ 2.8
Rtn4Q99P72 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8
Rtn4Q99P72 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
Rtn4Q99P72 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC32.49■■■□□ 2.79
Rtn4Q99P72 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC32.47■■■□□ 2.79
Rtn4Q99P72 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC32.47■■■□□ 2.79
Rtn4Q99P72 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
Rtn4Q99P72 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC32.46■■■□□ 2.79
Rtn4Q99P72 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
Rtn4Q99P72 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC32.42■■■□□ 2.78
Rtn4Q99P72 Tdp2-203ENSMUST00000223804 1136 ntBASIC32.39■■■□□ 2.78
Rtn4Q99P72 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
Rtn4Q99P72 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Rtn4Q99P72 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC32.37■■■□□ 2.77
Rtn4Q99P72 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Rtn4Q99P72 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC32.34■■■□□ 2.77
Rtn4Q99P72 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
Rtn4Q99P72 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC32.31■■■□□ 2.76
Rtn4Q99P72 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
Rtn4Q99P72 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC32.3■■■□□ 2.76
Rtn4Q99P72 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
Rtn4Q99P72 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
Rtn4Q99P72 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
Rtn4Q99P72 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC32.22■■■□□ 2.75
Rtn4Q99P72 Gm45855-201ENSMUST00000212546 880 ntBASIC32.21■■■□□ 2.75
Rtn4Q99P72 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
Rtn4Q99P72 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
Rtn4Q99P72 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC32.18■■■□□ 2.74
Rtn4Q99P72 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC32.18■■■□□ 2.74
Rtn4Q99P72 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC32.17■■■□□ 2.74
Rtn4Q99P72 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
Rtn4Q99P72 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC32.16■■■□□ 2.74
Rtn4Q99P72 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
Rtn4Q99P72 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
Rtn4Q99P72 Zxda-201ENSMUST00000117281 2621 ntBASIC32.13■■■□□ 2.73
Rtn4Q99P72 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Rtn4Q99P72 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Rtn4Q99P72 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC32.07■■■□□ 2.72
Rtn4Q99P72 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC32.07■■■□□ 2.72
Rtn4Q99P72 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
Rtn4Q99P72 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Rtn4Q99P72 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
Rtn4Q99P72 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
Rtn4Q99P72 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.72
Rtn4Q99P72 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC32.01■■■□□ 2.72
Rtn4Q99P72 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.72
Rtn4Q99P72 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC31.98■■■□□ 2.71
Rtn4Q99P72 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC31.98■■■□□ 2.71
Rtn4Q99P72 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Rtn4Q99P72 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
Rtn4Q99P72 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC31.94■■■□□ 2.7
Rtn4Q99P72 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC31.94■■■□□ 2.7
Rtn4Q99P72 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC31.94■■■□□ 2.7
Rtn4Q99P72 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC31.93■■■□□ 2.7
Rtn4Q99P72 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC31.92■■■□□ 2.7
Rtn4Q99P72 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC31.92■■■□□ 2.7
Rtn4Q99P72 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Rtn4Q99P72 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC31.91■■■□□ 2.7
Rtn4Q99P72 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
Rtn4Q99P72 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC31.91■■■□□ 2.7
Rtn4Q99P72 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC31.9■■■□□ 2.7
Rtn4Q99P72 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC31.9■■■□□ 2.7
Rtn4Q99P72 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC31.89■■■□□ 2.7
Rtn4Q99P72 Gm9397-201ENSMUST00000200125 605 ntBASIC31.89■■■□□ 2.7
Rtn4Q99P72 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Rtn4Q99P72 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Rtn4Q99P72 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
Retrieved 100 of 76,532 protein–RNA pairs in 452.4 ms