Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Smc1bQ920F6 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC30.11■■■□□ 2.41
Smc1bQ920F6 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC30.11■■■□□ 2.41
Smc1bQ920F6 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC30.11■■■□□ 2.41
Smc1bQ920F6 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC30.1■■■□□ 2.41
Smc1bQ920F6 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Smc1bQ920F6 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Smc1bQ920F6 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC30.07■■■□□ 2.4
Smc1bQ920F6 Peli2-204ENSMUST00000226513 1320 ntBASIC30.05■■■□□ 2.4
Smc1bQ920F6 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
Smc1bQ920F6 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC30.04■■■□□ 2.4
Smc1bQ920F6 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC30.03■■■□□ 2.4
Smc1bQ920F6 Gm45855-201ENSMUST00000212546 880 ntBASIC30.03■■■□□ 2.4
Smc1bQ920F6 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC30■■■□□ 2.39
Smc1bQ920F6 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC29.99■■■□□ 2.39
Smc1bQ920F6 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC29.98■■■□□ 2.39
Smc1bQ920F6 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC29.96■■■□□ 2.39
Smc1bQ920F6 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Smc1bQ920F6 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC29.96■■■□□ 2.39
Smc1bQ920F6 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
Smc1bQ920F6 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC29.95■■■□□ 2.38
Smc1bQ920F6 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
Smc1bQ920F6 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Smc1bQ920F6 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
Smc1bQ920F6 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC29.91■■■□□ 2.38
Smc1bQ920F6 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC29.86■■■□□ 2.37
Smc1bQ920F6 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC29.82■■■□□ 2.36
Smc1bQ920F6 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
Smc1bQ920F6 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC29.8■■■□□ 2.36
Smc1bQ920F6 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Smc1bQ920F6 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Smc1bQ920F6 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC29.78■■■□□ 2.36
Smc1bQ920F6 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Smc1bQ920F6 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC29.76■■■□□ 2.35
Smc1bQ920F6 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Smc1bQ920F6 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
Smc1bQ920F6 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
Smc1bQ920F6 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
Smc1bQ920F6 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Smc1bQ920F6 Gm5987-201ENSMUST00000196433 1151 ntBASIC29.68■■■□□ 2.34
Smc1bQ920F6 Gm9397-201ENSMUST00000200125 605 ntBASIC29.68■■■□□ 2.34
Smc1bQ920F6 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
Smc1bQ920F6 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
Smc1bQ920F6 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
Smc1bQ920F6 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC29.66■■■□□ 2.34
Smc1bQ920F6 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC29.64■■■□□ 2.34
Smc1bQ920F6 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
Smc1bQ920F6 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC29.64■■■□□ 2.34
Smc1bQ920F6 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC29.63■■■□□ 2.33
Smc1bQ920F6 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Smc1bQ920F6 Zfp131-207ENSMUST00000224946 1783 ntBASIC29.62■■■□□ 2.33
Smc1bQ920F6 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Smc1bQ920F6 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Smc1bQ920F6 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Smc1bQ920F6 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC29.6■■■□□ 2.33
Smc1bQ920F6 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC29.6■■■□□ 2.33
Smc1bQ920F6 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Smc1bQ920F6 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Smc1bQ920F6 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC29.56■■■□□ 2.32
Smc1bQ920F6 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Smc1bQ920F6 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC29.55■■■□□ 2.32
Smc1bQ920F6 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Smc1bQ920F6 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC29.54■■■□□ 2.32
Smc1bQ920F6 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Smc1bQ920F6 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC29.53■■■□□ 2.32
Smc1bQ920F6 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC29.52■■■□□ 2.32
Smc1bQ920F6 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Smc1bQ920F6 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Smc1bQ920F6 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
Smc1bQ920F6 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC29.48■■■□□ 2.31
Smc1bQ920F6 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC29.47■■■□□ 2.31
Smc1bQ920F6 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
Smc1bQ920F6 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Smc1bQ920F6 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
Smc1bQ920F6 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC29.46■■■□□ 2.31
Smc1bQ920F6 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
Smc1bQ920F6 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC29.44■■■□□ 2.3
Smc1bQ920F6 Mipep-204ENSMUST00000225043 1548 ntBASIC29.43■■■□□ 2.3
Smc1bQ920F6 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
Smc1bQ920F6 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC29.42■■■□□ 2.3
Smc1bQ920F6 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
Smc1bQ920F6 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Smc1bQ920F6 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC29.4■■■□□ 2.3
Smc1bQ920F6 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
Smc1bQ920F6 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC29.39■■■□□ 2.3
Smc1bQ920F6 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC29.39■■■□□ 2.3
Smc1bQ920F6 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC29.39■■■□□ 2.3
Smc1bQ920F6 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC29.37■■■□□ 2.29
Smc1bQ920F6 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
Smc1bQ920F6 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC29.36■■■□□ 2.29
Smc1bQ920F6 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC29.34■■■□□ 2.29
Smc1bQ920F6 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Smc1bQ920F6 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC29.33■■■□□ 2.29
Smc1bQ920F6 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
Smc1bQ920F6 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC29.32■■■□□ 2.28
Smc1bQ920F6 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC29.28■■■□□ 2.28
Smc1bQ920F6 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC29.27■■■□□ 2.28
Smc1bQ920F6 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC29.26■■■□□ 2.27
Smc1bQ920F6 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC29.24■■■□□ 2.27
Smc1bQ920F6 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms