Protein–RNA interactions for Protein: Q91Y09

Pcdhac2, Protocadherin alpha C2, mousemouse

Predictions only

Length 1,006 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac2Q91Y09 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Pcdhac2Q91Y09 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC29.41■■■□□ 2.3
Pcdhac2Q91Y09 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Pcdhac2Q91Y09 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
Pcdhac2Q91Y09 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
Pcdhac2Q91Y09 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
Pcdhac2Q91Y09 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Pcdhac2Q91Y09 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC29.31■■■□□ 2.28
Pcdhac2Q91Y09 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC29.29■■■□□ 2.28
Pcdhac2Q91Y09 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Pcdhac2Q91Y09 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Pcdhac2Q91Y09 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
Pcdhac2Q91Y09 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
Pcdhac2Q91Y09 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC29.26■■■□□ 2.27
Pcdhac2Q91Y09 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC29.25■■■□□ 2.27
Pcdhac2Q91Y09 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC29.24■■■□□ 2.27
Pcdhac2Q91Y09 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Pcdhac2Q91Y09 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC29.22■■■□□ 2.27
Pcdhac2Q91Y09 Tdp2-203ENSMUST00000223804 1136 ntBASIC29.21■■■□□ 2.27
Pcdhac2Q91Y09 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
Pcdhac2Q91Y09 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC29.18■■■□□ 2.26
Pcdhac2Q91Y09 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC29.12■■■□□ 2.25
Pcdhac2Q91Y09 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC29.12■■■□□ 2.25
Pcdhac2Q91Y09 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC29.11■■■□□ 2.25
Pcdhac2Q91Y09 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
Pcdhac2Q91Y09 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Pcdhac2Q91Y09 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC29.08■■■□□ 2.25
Pcdhac2Q91Y09 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Pcdhac2Q91Y09 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Pcdhac2Q91Y09 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Pcdhac2Q91Y09 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC29.04■■■□□ 2.24
Pcdhac2Q91Y09 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Pcdhac2Q91Y09 Gm45855-201ENSMUST00000212546 880 ntBASIC29.03■■■□□ 2.24
Pcdhac2Q91Y09 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
Pcdhac2Q91Y09 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC29.02■■■□□ 2.24
Pcdhac2Q91Y09 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC29.01■■■□□ 2.23
Pcdhac2Q91Y09 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
Pcdhac2Q91Y09 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC29.01■■■□□ 2.23
Pcdhac2Q91Y09 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC28.96■■■□□ 2.23
Pcdhac2Q91Y09 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC28.95■■■□□ 2.22
Pcdhac2Q91Y09 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Pcdhac2Q91Y09 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Pcdhac2Q91Y09 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC28.91■■■□□ 2.22
Pcdhac2Q91Y09 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
Pcdhac2Q91Y09 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC28.89■■■□□ 2.22
Pcdhac2Q91Y09 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
Pcdhac2Q91Y09 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
Pcdhac2Q91Y09 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC28.85■■■□□ 2.21
Pcdhac2Q91Y09 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Pcdhac2Q91Y09 Gm9397-201ENSMUST00000200125 605 ntBASIC28.82■■■□□ 2.2
Pcdhac2Q91Y09 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Pcdhac2Q91Y09 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC28.81■■■□□ 2.2
Pcdhac2Q91Y09 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
Pcdhac2Q91Y09 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC28.79■■■□□ 2.2
Pcdhac2Q91Y09 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
Pcdhac2Q91Y09 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC28.78■■■□□ 2.2
Pcdhac2Q91Y09 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Pcdhac2Q91Y09 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
Pcdhac2Q91Y09 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
Pcdhac2Q91Y09 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Pcdhac2Q91Y09 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Pcdhac2Q91Y09 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
Pcdhac2Q91Y09 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC28.72■■■□□ 2.19
Pcdhac2Q91Y09 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Pcdhac2Q91Y09 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC28.72■■■□□ 2.19
Pcdhac2Q91Y09 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC28.71■■■□□ 2.19
Pcdhac2Q91Y09 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
Pcdhac2Q91Y09 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC28.7■■■□□ 2.18
Pcdhac2Q91Y09 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC28.69■■■□□ 2.18
Pcdhac2Q91Y09 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC28.68■■■□□ 2.18
Pcdhac2Q91Y09 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC28.68■■■□□ 2.18
Pcdhac2Q91Y09 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Pcdhac2Q91Y09 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
Pcdhac2Q91Y09 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
Pcdhac2Q91Y09 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Pcdhac2Q91Y09 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC28.64■■■□□ 2.18
Pcdhac2Q91Y09 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC28.63■■■□□ 2.17
Pcdhac2Q91Y09 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Pcdhac2Q91Y09 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC28.61■■■□□ 2.17
Pcdhac2Q91Y09 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC28.61■■■□□ 2.17
Pcdhac2Q91Y09 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Pcdhac2Q91Y09 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
Pcdhac2Q91Y09 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Pcdhac2Q91Y09 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Pcdhac2Q91Y09 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Pcdhac2Q91Y09 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC28.53■■■□□ 2.16
Pcdhac2Q91Y09 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC28.53■■■□□ 2.16
Pcdhac2Q91Y09 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
Pcdhac2Q91Y09 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Pcdhac2Q91Y09 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC28.5■■■□□ 2.15
Pcdhac2Q91Y09 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC28.5■■■□□ 2.15
Pcdhac2Q91Y09 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC28.49■■■□□ 2.15
Pcdhac2Q91Y09 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Pcdhac2Q91Y09 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC28.48■■■□□ 2.15
Pcdhac2Q91Y09 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
Pcdhac2Q91Y09 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC28.47■■■□□ 2.15
Pcdhac2Q91Y09 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Pcdhac2Q91Y09 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC28.43■■■□□ 2.14
Pcdhac2Q91Y09 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Pcdhac2Q91Y09 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms