Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Mipep-204ENSMUST00000225043 1548 ntBASIC27.68■■■□□ 2.02
Pcdhb18Q91Y02 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Pcdhb18Q91Y02 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC27.68■■■□□ 2.02
Pcdhb18Q91Y02 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
Pcdhb18Q91Y02 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC27.65■■■□□ 2.02
Pcdhb18Q91Y02 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
Pcdhb18Q91Y02 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC27.63■■■□□ 2.01
Pcdhb18Q91Y02 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Pcdhb18Q91Y02 Tdp2-203ENSMUST00000223804 1136 ntBASIC27.61■■■□□ 2.01
Pcdhb18Q91Y02 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
Pcdhb18Q91Y02 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Pcdhb18Q91Y02 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC27.59■■■□□ 2.01
Pcdhb18Q91Y02 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC27.58■■■□□ 2.01
Pcdhb18Q91Y02 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC27.57■■■□□ 2
Pcdhb18Q91Y02 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Pcdhb18Q91Y02 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC27.56■■■□□ 2
Pcdhb18Q91Y02 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC27.54■■■□□ 2
Pcdhb18Q91Y02 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Pcdhb18Q91Y02 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC27.54■■■□□ 2
Pcdhb18Q91Y02 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC27.52■■■□□ 2
Pcdhb18Q91Y02 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC27.52■■■□□ 2
Pcdhb18Q91Y02 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC27.51■■□□□ 1.99
Pcdhb18Q91Y02 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
Pcdhb18Q91Y02 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Pcdhb18Q91Y02 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC27.45■■□□□ 1.99
Pcdhb18Q91Y02 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
Pcdhb18Q91Y02 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Pcdhb18Q91Y02 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Pcdhb18Q91Y02 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Pcdhb18Q91Y02 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC27.4■■□□□ 1.98
Pcdhb18Q91Y02 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Pcdhb18Q91Y02 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC27.39■■□□□ 1.98
Pcdhb18Q91Y02 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC27.39■■□□□ 1.98
Pcdhb18Q91Y02 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC27.37■■□□□ 1.97
Pcdhb18Q91Y02 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Pcdhb18Q91Y02 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Pcdhb18Q91Y02 Gm45855-201ENSMUST00000212546 880 ntBASIC27.29■■□□□ 1.96
Pcdhb18Q91Y02 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC27.28■■□□□ 1.96
Pcdhb18Q91Y02 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC27.27■■□□□ 1.96
Pcdhb18Q91Y02 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
Pcdhb18Q91Y02 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC27.26■■□□□ 1.95
Pcdhb18Q91Y02 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Pcdhb18Q91Y02 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC27.25■■□□□ 1.95
Pcdhb18Q91Y02 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
Pcdhb18Q91Y02 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
Pcdhb18Q91Y02 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Pcdhb18Q91Y02 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
Pcdhb18Q91Y02 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC27.19■■□□□ 1.94
Pcdhb18Q91Y02 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC27.18■■□□□ 1.94
Pcdhb18Q91Y02 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC27.18■■□□□ 1.94
Pcdhb18Q91Y02 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Pcdhb18Q91Y02 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Pcdhb18Q91Y02 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Pcdhb18Q91Y02 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC27.16■■□□□ 1.94
Pcdhb18Q91Y02 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC27.14■■□□□ 1.94
Pcdhb18Q91Y02 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Pcdhb18Q91Y02 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Pcdhb18Q91Y02 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC27.1■■□□□ 1.93
Pcdhb18Q91Y02 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Pcdhb18Q91Y02 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Pcdhb18Q91Y02 Gm9397-201ENSMUST00000200125 605 ntBASIC27.08■■□□□ 1.93
Pcdhb18Q91Y02 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC27.07■■□□□ 1.92
Pcdhb18Q91Y02 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC27.06■■□□□ 1.92
Pcdhb18Q91Y02 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Pcdhb18Q91Y02 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC27.04■■□□□ 1.92
Pcdhb18Q91Y02 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC27.03■■□□□ 1.92
Pcdhb18Q91Y02 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Pcdhb18Q91Y02 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Pcdhb18Q91Y02 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
Pcdhb18Q91Y02 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC27■■□□□ 1.91
Pcdhb18Q91Y02 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC26.98■■□□□ 1.91
Pcdhb18Q91Y02 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Pcdhb18Q91Y02 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Pcdhb18Q91Y02 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
Pcdhb18Q91Y02 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC26.97■■□□□ 1.91
Pcdhb18Q91Y02 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
Pcdhb18Q91Y02 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
Pcdhb18Q91Y02 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC26.93■■□□□ 1.9
Pcdhb18Q91Y02 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC26.93■■□□□ 1.9
Pcdhb18Q91Y02 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
Pcdhb18Q91Y02 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Pcdhb18Q91Y02 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC26.92■■□□□ 1.9
Pcdhb18Q91Y02 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Pcdhb18Q91Y02 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Pcdhb18Q91Y02 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC26.89■■□□□ 1.9
Pcdhb18Q91Y02 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Pcdhb18Q91Y02 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Pcdhb18Q91Y02 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
Pcdhb18Q91Y02 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC26.87■■□□□ 1.89
Pcdhb18Q91Y02 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC26.86■■□□□ 1.89
Pcdhb18Q91Y02 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Pcdhb18Q91Y02 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Pcdhb18Q91Y02 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC26.84■■□□□ 1.89
Pcdhb18Q91Y02 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC26.84■■□□□ 1.89
Pcdhb18Q91Y02 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC26.84■■□□□ 1.89
Pcdhb18Q91Y02 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC26.81■■□□□ 1.88
Pcdhb18Q91Y02 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC26.81■■□□□ 1.88
Pcdhb18Q91Y02 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
Pcdhb18Q91Y02 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC26.79■■□□□ 1.88
Pcdhb18Q91Y02 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms