Protein–RNA interactions for Protein: Q8R4I4

Gtf2a1l, TFIIA-alpha and beta-like factor, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2a1lQ8R4I4 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Gtf2a1lQ8R4I4 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC25.33■■□□□ 1.65
Gtf2a1lQ8R4I4 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Gtf2a1lQ8R4I4 AL845457.1-201ENSMUST00000197244 68 ntBASIC25.31■■□□□ 1.64
Gtf2a1lQ8R4I4 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Gtf2a1lQ8R4I4 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC25.29■■□□□ 1.64
Gtf2a1lQ8R4I4 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Gtf2a1lQ8R4I4 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
Gtf2a1lQ8R4I4 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC25.28■■□□□ 1.64
Gtf2a1lQ8R4I4 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC25.26■■□□□ 1.63
Gtf2a1lQ8R4I4 Gm6658-202ENSMUST00000209493 1885 ntBASIC25.26■■□□□ 1.63
Gtf2a1lQ8R4I4 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Gtf2a1lQ8R4I4 AC166822.3-201ENSMUST00000227394 661 ntBASIC25.23■■□□□ 1.63
Gtf2a1lQ8R4I4 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Gtf2a1lQ8R4I4 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Gtf2a1lQ8R4I4 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC25.2■■□□□ 1.62
Gtf2a1lQ8R4I4 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Gtf2a1lQ8R4I4 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Gtf2a1lQ8R4I4 Mipep-204ENSMUST00000225043 1548 ntBASIC25.17■■□□□ 1.62
Gtf2a1lQ8R4I4 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Gtf2a1lQ8R4I4 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Gtf2a1lQ8R4I4 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Gtf2a1lQ8R4I4 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
Gtf2a1lQ8R4I4 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
Gtf2a1lQ8R4I4 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Gtf2a1lQ8R4I4 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC25.08■■□□□ 1.61
Gtf2a1lQ8R4I4 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Gtf2a1lQ8R4I4 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Gtf2a1lQ8R4I4 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC25.03■■□□□ 1.6
Gtf2a1lQ8R4I4 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC25.03■■□□□ 1.6
Gtf2a1lQ8R4I4 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Gtf2a1lQ8R4I4 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Gtf2a1lQ8R4I4 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Gtf2a1lQ8R4I4 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Gtf2a1lQ8R4I4 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Gtf2a1lQ8R4I4 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
Gtf2a1lQ8R4I4 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC24.97■■□□□ 1.59
Gtf2a1lQ8R4I4 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Gtf2a1lQ8R4I4 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
Gtf2a1lQ8R4I4 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Gtf2a1lQ8R4I4 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
Gtf2a1lQ8R4I4 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC24.93■■□□□ 1.58
Gtf2a1lQ8R4I4 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Gtf2a1lQ8R4I4 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Gtf2a1lQ8R4I4 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Gtf2a1lQ8R4I4 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC24.91■■□□□ 1.58
Gtf2a1lQ8R4I4 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Gtf2a1lQ8R4I4 AC153504.1-201ENSMUST00000218379 2290 ntBASIC24.87■■□□□ 1.57
Gtf2a1lQ8R4I4 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Gtf2a1lQ8R4I4 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Gtf2a1lQ8R4I4 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Gtf2a1lQ8R4I4 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC24.84■■□□□ 1.57
Gtf2a1lQ8R4I4 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC24.84■■□□□ 1.57
Gtf2a1lQ8R4I4 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC24.84■■□□□ 1.57
Gtf2a1lQ8R4I4 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
Gtf2a1lQ8R4I4 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Gtf2a1lQ8R4I4 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Gtf2a1lQ8R4I4 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Gtf2a1lQ8R4I4 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Gtf2a1lQ8R4I4 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Gtf2a1lQ8R4I4 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC24.79■■□□□ 1.56
Gtf2a1lQ8R4I4 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Gtf2a1lQ8R4I4 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC24.78■■□□□ 1.56
Gtf2a1lQ8R4I4 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC24.78■■□□□ 1.56
Gtf2a1lQ8R4I4 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
Gtf2a1lQ8R4I4 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Gtf2a1lQ8R4I4 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Gtf2a1lQ8R4I4 Zfp131-205ENSMUST00000223812 663 ntBASIC24.75■■□□□ 1.55
Gtf2a1lQ8R4I4 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Gtf2a1lQ8R4I4 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Gtf2a1lQ8R4I4 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC24.73■■□□□ 1.55
Gtf2a1lQ8R4I4 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
Gtf2a1lQ8R4I4 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
Gtf2a1lQ8R4I4 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC24.7■■□□□ 1.54
Gtf2a1lQ8R4I4 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Gtf2a1lQ8R4I4 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Gtf2a1lQ8R4I4 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Gtf2a1lQ8R4I4 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
Gtf2a1lQ8R4I4 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Gtf2a1lQ8R4I4 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Gtf2a1lQ8R4I4 Gm16148-201ENSMUST00000119653 893 ntBASIC24.65■■□□□ 1.54
Gtf2a1lQ8R4I4 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Gtf2a1lQ8R4I4 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Gtf2a1lQ8R4I4 Peli2-204ENSMUST00000226513 1320 ntBASIC24.62■■□□□ 1.53
Gtf2a1lQ8R4I4 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC24.62■■□□□ 1.53
Gtf2a1lQ8R4I4 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Gtf2a1lQ8R4I4 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Gtf2a1lQ8R4I4 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Gtf2a1lQ8R4I4 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Gtf2a1lQ8R4I4 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Gtf2a1lQ8R4I4 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Gtf2a1lQ8R4I4 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Gtf2a1lQ8R4I4 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Gtf2a1lQ8R4I4 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
Gtf2a1lQ8R4I4 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC24.58■■□□□ 1.53
Gtf2a1lQ8R4I4 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC24.58■■□□□ 1.53
Gtf2a1lQ8R4I4 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC24.57■■□□□ 1.52
Gtf2a1lQ8R4I4 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC24.57■■□□□ 1.52
Gtf2a1lQ8R4I4 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Gtf2a1lQ8R4I4 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms