Protein–RNA interactions for Protein: Q8R4I1

Atxn7, Ataxin-7, mousemouse

Predictions only

Length 867 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn7Q8R4I1 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC31.27■■■□□ 2.6
Atxn7Q8R4I1 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC31.27■■■□□ 2.6
Atxn7Q8R4I1 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
Atxn7Q8R4I1 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC31.25■■■□□ 2.59
Atxn7Q8R4I1 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Atxn7Q8R4I1 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC31.2■■■□□ 2.59
Atxn7Q8R4I1 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
Atxn7Q8R4I1 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC31.16■■■□□ 2.58
Atxn7Q8R4I1 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Atxn7Q8R4I1 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Atxn7Q8R4I1 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC31.14■■■□□ 2.58
Atxn7Q8R4I1 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
Atxn7Q8R4I1 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC31.13■■■□□ 2.57
Atxn7Q8R4I1 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Atxn7Q8R4I1 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Atxn7Q8R4I1 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC31.1■■■□□ 2.57
Atxn7Q8R4I1 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Atxn7Q8R4I1 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Atxn7Q8R4I1 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
Atxn7Q8R4I1 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
Atxn7Q8R4I1 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC31.07■■■□□ 2.56
Atxn7Q8R4I1 Tdp2-203ENSMUST00000223804 1136 ntBASIC31.06■■■□□ 2.56
Atxn7Q8R4I1 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Atxn7Q8R4I1 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Atxn7Q8R4I1 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Atxn7Q8R4I1 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Atxn7Q8R4I1 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC31.04■■■□□ 2.56
Atxn7Q8R4I1 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Atxn7Q8R4I1 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC31■■■□□ 2.55
Atxn7Q8R4I1 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC30.98■■■□□ 2.55
Atxn7Q8R4I1 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Atxn7Q8R4I1 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC30.97■■■□□ 2.55
Atxn7Q8R4I1 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC30.95■■■□□ 2.55
Atxn7Q8R4I1 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC30.9■■■□□ 2.54
Atxn7Q8R4I1 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC30.9■■■□□ 2.54
Atxn7Q8R4I1 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC30.86■■■□□ 2.53
Atxn7Q8R4I1 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC30.82■■■□□ 2.52
Atxn7Q8R4I1 Gm45855-201ENSMUST00000212546 880 ntBASIC30.81■■■□□ 2.52
Atxn7Q8R4I1 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Atxn7Q8R4I1 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
Atxn7Q8R4I1 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Atxn7Q8R4I1 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
Atxn7Q8R4I1 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Atxn7Q8R4I1 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
Atxn7Q8R4I1 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
Atxn7Q8R4I1 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
Atxn7Q8R4I1 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Atxn7Q8R4I1 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC30.7■■■□□ 2.51
Atxn7Q8R4I1 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC30.69■■■□□ 2.5
Atxn7Q8R4I1 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC30.68■■■□□ 2.5
Atxn7Q8R4I1 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC30.67■■■□□ 2.5
Atxn7Q8R4I1 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC30.67■■■□□ 2.5
Atxn7Q8R4I1 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Atxn7Q8R4I1 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Atxn7Q8R4I1 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Atxn7Q8R4I1 Gm9397-201ENSMUST00000200125 605 ntBASIC30.63■■■□□ 2.49
Atxn7Q8R4I1 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC30.62■■■□□ 2.49
Atxn7Q8R4I1 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Atxn7Q8R4I1 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC30.61■■■□□ 2.49
Atxn7Q8R4I1 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC30.59■■■□□ 2.49
Atxn7Q8R4I1 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Atxn7Q8R4I1 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Atxn7Q8R4I1 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC30.57■■■□□ 2.48
Atxn7Q8R4I1 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
Atxn7Q8R4I1 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
Atxn7Q8R4I1 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC30.55■■■□□ 2.48
Atxn7Q8R4I1 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC30.54■■■□□ 2.48
Atxn7Q8R4I1 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
Atxn7Q8R4I1 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
Atxn7Q8R4I1 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
Atxn7Q8R4I1 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC30.51■■■□□ 2.47
Atxn7Q8R4I1 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Atxn7Q8R4I1 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Atxn7Q8R4I1 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC30.48■■■□□ 2.47
Atxn7Q8R4I1 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC30.47■■■□□ 2.47
Atxn7Q8R4I1 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC30.47■■■□□ 2.47
Atxn7Q8R4I1 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC30.46■■■□□ 2.47
Atxn7Q8R4I1 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Atxn7Q8R4I1 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC30.44■■■□□ 2.46
Atxn7Q8R4I1 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC30.43■■■□□ 2.46
Atxn7Q8R4I1 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
Atxn7Q8R4I1 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Atxn7Q8R4I1 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Atxn7Q8R4I1 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC30.42■■■□□ 2.46
Atxn7Q8R4I1 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC30.41■■■□□ 2.46
Atxn7Q8R4I1 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Atxn7Q8R4I1 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC30.4■■■□□ 2.46
Atxn7Q8R4I1 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC30.38■■■□□ 2.45
Atxn7Q8R4I1 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC30.38■■■□□ 2.45
Atxn7Q8R4I1 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC30.37■■■□□ 2.45
Atxn7Q8R4I1 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Atxn7Q8R4I1 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Atxn7Q8R4I1 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Atxn7Q8R4I1 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Atxn7Q8R4I1 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Atxn7Q8R4I1 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Atxn7Q8R4I1 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC30.32■■■□□ 2.44
Atxn7Q8R4I1 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Atxn7Q8R4I1 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC30.3■■■□□ 2.44
Atxn7Q8R4I1 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC30.29■■■□□ 2.44
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms