Protein–RNA interactions for Protein: Q8R2E1

Vmn1r38, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r38Q8R2E1 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Vmn1r38Q8R2E1 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Vmn1r38Q8R2E1 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Vmn1r38Q8R2E1 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
Vmn1r38Q8R2E1 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Vmn1r38Q8R2E1 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.51
Vmn1r38Q8R2E1 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Vmn1r38Q8R2E1 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
Vmn1r38Q8R2E1 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Vmn1r38Q8R2E1 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Vmn1r38Q8R2E1 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
Vmn1r38Q8R2E1 AL845457.1-201ENSMUST00000197244 68 ntBASIC24.38■■□□□ 1.49
Vmn1r38Q8R2E1 Mipep-204ENSMUST00000225043 1548 ntBASIC24.38■■□□□ 1.49
Vmn1r38Q8R2E1 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Vmn1r38Q8R2E1 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Vmn1r38Q8R2E1 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Vmn1r38Q8R2E1 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Vmn1r38Q8R2E1 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
Vmn1r38Q8R2E1 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
Vmn1r38Q8R2E1 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
Vmn1r38Q8R2E1 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Vmn1r38Q8R2E1 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Vmn1r38Q8R2E1 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC24.32■■□□□ 1.48
Vmn1r38Q8R2E1 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC24.3■■□□□ 1.48
Vmn1r38Q8R2E1 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Vmn1r38Q8R2E1 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC24.28■■□□□ 1.48
Vmn1r38Q8R2E1 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Vmn1r38Q8R2E1 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Vmn1r38Q8R2E1 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Vmn1r38Q8R2E1 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Vmn1r38Q8R2E1 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Vmn1r38Q8R2E1 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Vmn1r38Q8R2E1 Gm6206-201ENSMUST00000133472 2199 ntBASIC24.23■■□□□ 1.47
Vmn1r38Q8R2E1 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Vmn1r38Q8R2E1 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.46
Vmn1r38Q8R2E1 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Vmn1r38Q8R2E1 Gm9905-201ENSMUST00000065740 1845 ntBASIC24.19■■□□□ 1.46
Vmn1r38Q8R2E1 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
Vmn1r38Q8R2E1 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Vmn1r38Q8R2E1 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Vmn1r38Q8R2E1 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Vmn1r38Q8R2E1 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Vmn1r38Q8R2E1 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Vmn1r38Q8R2E1 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Vmn1r38Q8R2E1 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.45
Vmn1r38Q8R2E1 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Vmn1r38Q8R2E1 Zxda-201ENSMUST00000117281 2621 ntBASIC24.13■■□□□ 1.45
Vmn1r38Q8R2E1 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC24.12■■□□□ 1.45
Vmn1r38Q8R2E1 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Vmn1r38Q8R2E1 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
Vmn1r38Q8R2E1 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC24.08■■□□□ 1.44
Vmn1r38Q8R2E1 Gm25262-201ENSMUST00000174934 133 ntBASIC24.07■■□□□ 1.44
Vmn1r38Q8R2E1 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
Vmn1r38Q8R2E1 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
Vmn1r38Q8R2E1 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC24.01■■□□□ 1.43
Vmn1r38Q8R2E1 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Vmn1r38Q8R2E1 Gm43445-201ENSMUST00000198564 2091 ntBASIC24■■□□□ 1.43
Vmn1r38Q8R2E1 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
Vmn1r38Q8R2E1 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Vmn1r38Q8R2E1 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Vmn1r38Q8R2E1 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Vmn1r38Q8R2E1 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Vmn1r38Q8R2E1 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Vmn1r38Q8R2E1 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Vmn1r38Q8R2E1 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Vmn1r38Q8R2E1 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Vmn1r38Q8R2E1 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Vmn1r38Q8R2E1 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC23.9■■□□□ 1.42
Vmn1r38Q8R2E1 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC23.9■■□□□ 1.42
Vmn1r38Q8R2E1 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Vmn1r38Q8R2E1 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Vmn1r38Q8R2E1 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
Vmn1r38Q8R2E1 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC23.87■■□□□ 1.41
Vmn1r38Q8R2E1 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Vmn1r38Q8R2E1 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Vmn1r38Q8R2E1 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Vmn1r38Q8R2E1 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Vmn1r38Q8R2E1 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC23.84■■□□□ 1.41
Vmn1r38Q8R2E1 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Vmn1r38Q8R2E1 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Vmn1r38Q8R2E1 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Vmn1r38Q8R2E1 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
Vmn1r38Q8R2E1 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Vmn1r38Q8R2E1 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Vmn1r38Q8R2E1 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Vmn1r38Q8R2E1 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Vmn1r38Q8R2E1 Amer2-203ENSMUST00000225247 2662 ntBASIC23.77■■□□□ 1.39
Vmn1r38Q8R2E1 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Vmn1r38Q8R2E1 AC166822.3-201ENSMUST00000227394 661 ntBASIC23.76■■□□□ 1.39
Vmn1r38Q8R2E1 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
Vmn1r38Q8R2E1 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Vmn1r38Q8R2E1 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Vmn1r38Q8R2E1 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Vmn1r38Q8R2E1 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Vmn1r38Q8R2E1 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Vmn1r38Q8R2E1 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Vmn1r38Q8R2E1 Gm17082-201ENSMUST00000166043 1091 ntBASIC23.72■■□□□ 1.39
Vmn1r38Q8R2E1 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Vmn1r38Q8R2E1 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Vmn1r38Q8R2E1 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms