Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC34.49■■■■□ 3.11
Chmp7Q8R1T1 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
Chmp7Q8R1T1 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC34.47■■■■□ 3.11
Chmp7Q8R1T1 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC34.44■■■■□ 3.1
Chmp7Q8R1T1 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC34.42■■■■□ 3.1
Chmp7Q8R1T1 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC34.41■■■■□ 3.1
Chmp7Q8R1T1 Tdp2-203ENSMUST00000223804 1136 ntBASIC34.39■■■■□ 3.1
Chmp7Q8R1T1 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1
Chmp7Q8R1T1 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1
Chmp7Q8R1T1 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC34.36■■■■□ 3.09
Chmp7Q8R1T1 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC34.36■■■■□ 3.09
Chmp7Q8R1T1 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC34.35■■■■□ 3.09
Chmp7Q8R1T1 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.09
Chmp7Q8R1T1 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC34.32■■■■□ 3.08
Chmp7Q8R1T1 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC34.32■■■■□ 3.08
Chmp7Q8R1T1 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
Chmp7Q8R1T1 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
Chmp7Q8R1T1 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
Chmp7Q8R1T1 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC34.28■■■■□ 3.08
Chmp7Q8R1T1 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
Chmp7Q8R1T1 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC34.23■■■■□ 3.07
Chmp7Q8R1T1 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC34.16■■■■□ 3.06
Chmp7Q8R1T1 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC34.16■■■■□ 3.06
Chmp7Q8R1T1 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC34.15■■■■□ 3.06
Chmp7Q8R1T1 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC34.14■■■■□ 3.06
Chmp7Q8R1T1 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC34.14■■■■□ 3.06
Chmp7Q8R1T1 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC34.14■■■■□ 3.06
Chmp7Q8R1T1 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC34.12■■■■□ 3.05
Chmp7Q8R1T1 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC34.11■■■■□ 3.05
Chmp7Q8R1T1 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC34.1■■■■□ 3.05
Chmp7Q8R1T1 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC34.1■■■■□ 3.05
Chmp7Q8R1T1 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC34.1■■■■□ 3.05
Chmp7Q8R1T1 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC34.08■■■■□ 3.05
Chmp7Q8R1T1 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC34.07■■■■□ 3.04
Chmp7Q8R1T1 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC34.05■■■■□ 3.04
Chmp7Q8R1T1 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC34.03■■■■□ 3.04
Chmp7Q8R1T1 Gm45855-201ENSMUST00000212546 880 ntBASIC34.03■■■■□ 3.04
Chmp7Q8R1T1 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC34■■■■□ 3.03
Chmp7Q8R1T1 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC33.96■■■■□ 3.03
Chmp7Q8R1T1 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC33.95■■■■□ 3.02
Chmp7Q8R1T1 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC33.94■■■■□ 3.02
Chmp7Q8R1T1 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC33.93■■■■□ 3.02
Chmp7Q8R1T1 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC33.92■■■■□ 3.02
Chmp7Q8R1T1 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC33.91■■■■□ 3.02
Chmp7Q8R1T1 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC33.89■■■■□ 3.02
Chmp7Q8R1T1 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC33.88■■■■□ 3.01
Chmp7Q8R1T1 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC33.85■■■■□ 3.01
Chmp7Q8R1T1 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC33.84■■■■□ 3.01
Chmp7Q8R1T1 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC33.83■■■■□ 3.01
Chmp7Q8R1T1 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC33.83■■■■□ 3.01
Chmp7Q8R1T1 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC33.82■■■■□ 3.01
Chmp7Q8R1T1 Gm9397-201ENSMUST00000200125 605 ntBASIC33.8■■■■□ 3
Chmp7Q8R1T1 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC33.77■■■■□ 3
Chmp7Q8R1T1 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC33.77■■■■□ 3
Chmp7Q8R1T1 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC33.76■■■□□ 2.99
Chmp7Q8R1T1 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC33.76■■■□□ 2.99
Chmp7Q8R1T1 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC33.75■■■□□ 2.99
Chmp7Q8R1T1 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC33.75■■■□□ 2.99
Chmp7Q8R1T1 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC33.74■■■□□ 2.99
Chmp7Q8R1T1 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC33.74■■■□□ 2.99
Chmp7Q8R1T1 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC33.74■■■□□ 2.99
Chmp7Q8R1T1 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC33.72■■■□□ 2.99
Chmp7Q8R1T1 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC33.72■■■□□ 2.99
Chmp7Q8R1T1 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC33.71■■■□□ 2.99
Chmp7Q8R1T1 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC33.69■■■□□ 2.98
Chmp7Q8R1T1 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC33.69■■■□□ 2.98
Chmp7Q8R1T1 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC33.67■■■□□ 2.98
Chmp7Q8R1T1 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC33.64■■■□□ 2.98
Chmp7Q8R1T1 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC33.63■■■□□ 2.97
Chmp7Q8R1T1 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC33.62■■■□□ 2.97
Chmp7Q8R1T1 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC33.62■■■□□ 2.97
Chmp7Q8R1T1 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC33.62■■■□□ 2.97
Chmp7Q8R1T1 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC33.61■■■□□ 2.97
Chmp7Q8R1T1 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC33.6■■■□□ 2.97
Chmp7Q8R1T1 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC33.59■■■□□ 2.97
Chmp7Q8R1T1 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC33.58■■■□□ 2.97
Chmp7Q8R1T1 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC33.56■■■□□ 2.96
Chmp7Q8R1T1 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC33.56■■■□□ 2.96
Chmp7Q8R1T1 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC33.55■■■□□ 2.96
Chmp7Q8R1T1 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC33.54■■■□□ 2.96
Chmp7Q8R1T1 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC33.53■■■□□ 2.96
Chmp7Q8R1T1 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC33.53■■■□□ 2.96
Chmp7Q8R1T1 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC33.53■■■□□ 2.96
Chmp7Q8R1T1 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC33.53■■■□□ 2.96
Chmp7Q8R1T1 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC33.51■■■□□ 2.95
Chmp7Q8R1T1 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC33.51■■■□□ 2.95
Chmp7Q8R1T1 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC33.5■■■□□ 2.95
Chmp7Q8R1T1 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC33.5■■■□□ 2.95
Chmp7Q8R1T1 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC33.49■■■□□ 2.95
Chmp7Q8R1T1 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC33.48■■■□□ 2.95
Chmp7Q8R1T1 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC33.47■■■□□ 2.95
Chmp7Q8R1T1 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC33.46■■■□□ 2.95
Chmp7Q8R1T1 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC33.44■■■□□ 2.94
Chmp7Q8R1T1 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
Chmp7Q8R1T1 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
Chmp7Q8R1T1 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC33.41■■■□□ 2.94
Chmp7Q8R1T1 Gm24970-201ENSMUST00000175582 82 ntBASIC33.41■■■□□ 2.94
Chmp7Q8R1T1 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC33.4■■■□□ 2.94
Chmp7Q8R1T1 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC33.39■■■□□ 2.94
Chmp7Q8R1T1 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC33.39■■■□□ 2.94
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms