Protein–RNA interactions for Protein: Q8R040

Rpp21, Ribonuclease P protein subunit p21, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp21Q8R040 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rpp21Q8R040 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rpp21Q8R040 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Rpp21Q8R040 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Rpp21Q8R040 AL845457.1-201ENSMUST00000197244 68 ntBASIC21.31■■□□□ 1
Rpp21Q8R040 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC21.31■■□□□ 1
Rpp21Q8R040 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rpp21Q8R040 Zxda-201ENSMUST00000117281 2621 ntBASIC21.3■■□□□ 1
Rpp21Q8R040 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC21.3■■□□□ 1
Rpp21Q8R040 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC21.29■■□□□ 1
Rpp21Q8R040 Mipep-204ENSMUST00000225043 1548 ntBASIC21.29■■□□□ 1
Rpp21Q8R040 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rpp21Q8R040 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Rpp21Q8R040 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Rpp21Q8R040 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rpp21Q8R040 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rpp21Q8R040 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Rpp21Q8R040 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rpp21Q8R040 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC21.21■□□□□ 0.99
Rpp21Q8R040 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Rpp21Q8R040 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Rpp21Q8R040 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rpp21Q8R040 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rpp21Q8R040 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rpp21Q8R040 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rpp21Q8R040 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rpp21Q8R040 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rpp21Q8R040 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rpp21Q8R040 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rpp21Q8R040 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Rpp21Q8R040 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rpp21Q8R040 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rpp21Q8R040 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rpp21Q8R040 Gm25262-201ENSMUST00000174934 133 ntBASIC21.09■□□□□ 0.97
Rpp21Q8R040 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Rpp21Q8R040 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.06■□□□□ 0.96
Rpp21Q8R040 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rpp21Q8R040 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rpp21Q8R040 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rpp21Q8R040 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rpp21Q8R040 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rpp21Q8R040 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rpp21Q8R040 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rpp21Q8R040 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Rpp21Q8R040 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rpp21Q8R040 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rpp21Q8R040 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rpp21Q8R040 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rpp21Q8R040 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rpp21Q8R040 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rpp21Q8R040 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.99■□□□□ 0.95
Rpp21Q8R040 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Rpp21Q8R040 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rpp21Q8R040 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
Rpp21Q8R040 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rpp21Q8R040 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rpp21Q8R040 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Rpp21Q8R040 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Rpp21Q8R040 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rpp21Q8R040 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Rpp21Q8R040 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Rpp21Q8R040 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Rpp21Q8R040 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC20.95■□□□□ 0.94
Rpp21Q8R040 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rpp21Q8R040 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rpp21Q8R040 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rpp21Q8R040 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rpp21Q8R040 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC20.9■□□□□ 0.94
Rpp21Q8R040 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.89■□□□□ 0.94
Rpp21Q8R040 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rpp21Q8R040 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.87■□□□□ 0.93
Rpp21Q8R040 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Rpp21Q8R040 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC20.87■□□□□ 0.93
Rpp21Q8R040 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rpp21Q8R040 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rpp21Q8R040 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rpp21Q8R040 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rpp21Q8R040 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rpp21Q8R040 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Rpp21Q8R040 AC166822.3-201ENSMUST00000227394 661 ntBASIC20.83■□□□□ 0.93
Rpp21Q8R040 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.83■□□□□ 0.93
Rpp21Q8R040 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rpp21Q8R040 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Rpp21Q8R040 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rpp21Q8R040 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rpp21Q8R040 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Rpp21Q8R040 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rpp21Q8R040 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rpp21Q8R040 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.79■□□□□ 0.92
Rpp21Q8R040 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rpp21Q8R040 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.77■□□□□ 0.92
Rpp21Q8R040 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rpp21Q8R040 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Rpp21Q8R040 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Rpp21Q8R040 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Rpp21Q8R040 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC20.77■□□□□ 0.92
Rpp21Q8R040 Gm27322-201ENSMUST00000184007 104 ntBASIC20.77■□□□□ 0.92
Rpp21Q8R040 Gm17082-201ENSMUST00000166043 1091 ntBASIC20.76■□□□□ 0.91
Rpp21Q8R040 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Rpp21Q8R040 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms