Protein–RNA interactions for Protein: Q8K4E0

Alms1, Alstrom syndrome protein 1 homolog, mousemouse

Predictions only

Length 3,251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alms1Q8K4E0 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Alms1Q8K4E0 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Alms1Q8K4E0 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Alms1Q8K4E0 Gm5987-201ENSMUST00000196433 1151 ntBASIC26.3■■□□□ 1.8
Alms1Q8K4E0 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Alms1Q8K4E0 Peli2-204ENSMUST00000226513 1320 ntBASIC26.29■■□□□ 1.8
Alms1Q8K4E0 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC26.27■■□□□ 1.8
Alms1Q8K4E0 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC26.27■■□□□ 1.8
Alms1Q8K4E0 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Alms1Q8K4E0 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Alms1Q8K4E0 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC26.25■■□□□ 1.79
Alms1Q8K4E0 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Alms1Q8K4E0 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
Alms1Q8K4E0 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC26.24■■□□□ 1.79
Alms1Q8K4E0 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC26.24■■□□□ 1.79
Alms1Q8K4E0 Gm45855-201ENSMUST00000212546 880 ntBASIC26.23■■□□□ 1.79
Alms1Q8K4E0 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC26.23■■□□□ 1.79
Alms1Q8K4E0 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC26.22■■□□□ 1.79
Alms1Q8K4E0 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Alms1Q8K4E0 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Alms1Q8K4E0 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Alms1Q8K4E0 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
Alms1Q8K4E0 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Alms1Q8K4E0 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Alms1Q8K4E0 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Alms1Q8K4E0 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.77
Alms1Q8K4E0 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Alms1Q8K4E0 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC26.13■■□□□ 1.77
Alms1Q8K4E0 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC26.12■■□□□ 1.77
Alms1Q8K4E0 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Alms1Q8K4E0 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.76
Alms1Q8K4E0 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Alms1Q8K4E0 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC26.04■■□□□ 1.76
Alms1Q8K4E0 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC26.04■■□□□ 1.76
Alms1Q8K4E0 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC26.01■■□□□ 1.75
Alms1Q8K4E0 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Alms1Q8K4E0 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Alms1Q8K4E0 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC25.98■■□□□ 1.75
Alms1Q8K4E0 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Alms1Q8K4E0 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC25.97■■□□□ 1.75
Alms1Q8K4E0 Mipep-204ENSMUST00000225043 1548 ntBASIC25.96■■□□□ 1.75
Alms1Q8K4E0 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Alms1Q8K4E0 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC25.95■■□□□ 1.75
Alms1Q8K4E0 Gm9397-201ENSMUST00000200125 605 ntBASIC25.95■■□□□ 1.74
Alms1Q8K4E0 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Alms1Q8K4E0 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC25.93■■□□□ 1.74
Alms1Q8K4E0 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Alms1Q8K4E0 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
Alms1Q8K4E0 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Alms1Q8K4E0 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Alms1Q8K4E0 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC25.87■■□□□ 1.73
Alms1Q8K4E0 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Alms1Q8K4E0 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Alms1Q8K4E0 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Alms1Q8K4E0 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC25.84■■□□□ 1.73
Alms1Q8K4E0 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC25.84■■□□□ 1.73
Alms1Q8K4E0 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Alms1Q8K4E0 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC25.83■■□□□ 1.73
Alms1Q8K4E0 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC25.83■■□□□ 1.73
Alms1Q8K4E0 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
Alms1Q8K4E0 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Alms1Q8K4E0 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC25.82■■□□□ 1.72
Alms1Q8K4E0 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Alms1Q8K4E0 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC25.81■■□□□ 1.72
Alms1Q8K4E0 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Alms1Q8K4E0 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Alms1Q8K4E0 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Alms1Q8K4E0 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC25.78■■□□□ 1.72
Alms1Q8K4E0 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC25.76■■□□□ 1.71
Alms1Q8K4E0 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Alms1Q8K4E0 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Alms1Q8K4E0 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Alms1Q8K4E0 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Alms1Q8K4E0 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC25.72■■□□□ 1.71
Alms1Q8K4E0 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Alms1Q8K4E0 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
Alms1Q8K4E0 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
Alms1Q8K4E0 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC25.66■■□□□ 1.7
Alms1Q8K4E0 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Alms1Q8K4E0 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.7
Alms1Q8K4E0 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Alms1Q8K4E0 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Alms1Q8K4E0 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Alms1Q8K4E0 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC25.62■■□□□ 1.69
Alms1Q8K4E0 Gm24970-201ENSMUST00000175582 82 ntBASIC25.61■■□□□ 1.69
Alms1Q8K4E0 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Alms1Q8K4E0 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC25.59■■□□□ 1.69
Alms1Q8K4E0 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC25.58■■□□□ 1.68
Alms1Q8K4E0 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Alms1Q8K4E0 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
Alms1Q8K4E0 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Alms1Q8K4E0 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC25.53■■□□□ 1.68
Alms1Q8K4E0 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
Alms1Q8K4E0 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Alms1Q8K4E0 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
Alms1Q8K4E0 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Alms1Q8K4E0 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Alms1Q8K4E0 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Alms1Q8K4E0 Gm8503-201ENSMUST00000118131 455 ntBASIC25.47■■□□□ 1.67
Alms1Q8K4E0 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC25.44■■□□□ 1.66
Retrieved 100 of 76,532 protein–RNA pairs in 8.3 ms