Protein–RNA interactions for Protein: Q8CI51

Pdlim5, PDZ and LIM domain protein 5, mousemouse

Known RBP Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5Q8CI51 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Pdlim5Q8CI51 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Pdlim5Q8CI51 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Pdlim5Q8CI51 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC24.04■■□□□ 1.44
Pdlim5Q8CI51 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Pdlim5Q8CI51 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Pdlim5Q8CI51 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC23.97■■□□□ 1.43
Pdlim5Q8CI51 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
Pdlim5Q8CI51 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Pdlim5Q8CI51 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC23.96■■□□□ 1.43
Pdlim5Q8CI51 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Pdlim5Q8CI51 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
Pdlim5Q8CI51 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Pdlim5Q8CI51 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Pdlim5Q8CI51 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Pdlim5Q8CI51 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
Pdlim5Q8CI51 Gm17082-201ENSMUST00000166043 1091 ntBASIC23.91■■□□□ 1.42
Pdlim5Q8CI51 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC23.91■■□□□ 1.42
Pdlim5Q8CI51 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
Pdlim5Q8CI51 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Pdlim5Q8CI51 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Pdlim5Q8CI51 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
Pdlim5Q8CI51 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC23.86■■□□□ 1.41
Pdlim5Q8CI51 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Pdlim5Q8CI51 Gm27322-201ENSMUST00000184007 104 ntBASIC23.85■■□□□ 1.41
Pdlim5Q8CI51 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC23.85■■□□□ 1.41
Pdlim5Q8CI51 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
Pdlim5Q8CI51 Zxda-201ENSMUST00000117281 2621 ntBASIC23.84■■□□□ 1.41
Pdlim5Q8CI51 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Pdlim5Q8CI51 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC23.83■■□□□ 1.41
Pdlim5Q8CI51 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC23.82■■□□□ 1.4
Pdlim5Q8CI51 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Pdlim5Q8CI51 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Pdlim5Q8CI51 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Pdlim5Q8CI51 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Pdlim5Q8CI51 AC166822.3-201ENSMUST00000227394 661 ntBASIC23.79■■□□□ 1.4
Pdlim5Q8CI51 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Pdlim5Q8CI51 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Pdlim5Q8CI51 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Pdlim5Q8CI51 Gm9905-201ENSMUST00000065740 1845 ntBASIC23.76■■□□□ 1.39
Pdlim5Q8CI51 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Pdlim5Q8CI51 Gm6206-201ENSMUST00000133472 2199 ntBASIC23.75■■□□□ 1.39
Pdlim5Q8CI51 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Pdlim5Q8CI51 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
Pdlim5Q8CI51 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Pdlim5Q8CI51 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Pdlim5Q8CI51 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Pdlim5Q8CI51 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.39
Pdlim5Q8CI51 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
Pdlim5Q8CI51 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Pdlim5Q8CI51 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC23.68■■□□□ 1.38
Pdlim5Q8CI51 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pdlim5Q8CI51 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
Pdlim5Q8CI51 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pdlim5Q8CI51 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Pdlim5Q8CI51 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Pdlim5Q8CI51 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Pdlim5Q8CI51 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
Pdlim5Q8CI51 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Pdlim5Q8CI51 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Pdlim5Q8CI51 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC23.62■■□□□ 1.37
Pdlim5Q8CI51 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Pdlim5Q8CI51 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Pdlim5Q8CI51 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Pdlim5Q8CI51 Gm26115-201ENSMUST00000175605 87 ntBASIC23.59■■□□□ 1.37
Pdlim5Q8CI51 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Pdlim5Q8CI51 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Pdlim5Q8CI51 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Pdlim5Q8CI51 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
Pdlim5Q8CI51 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Pdlim5Q8CI51 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Pdlim5Q8CI51 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Pdlim5Q8CI51 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Pdlim5Q8CI51 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Pdlim5Q8CI51 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Pdlim5Q8CI51 Gm8109-201ENSMUST00000194076 746 ntBASIC23.52■■□□□ 1.36
Pdlim5Q8CI51 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Pdlim5Q8CI51 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
Pdlim5Q8CI51 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Pdlim5Q8CI51 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Pdlim5Q8CI51 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Pdlim5Q8CI51 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Pdlim5Q8CI51 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Pdlim5Q8CI51 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Pdlim5Q8CI51 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Pdlim5Q8CI51 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Pdlim5Q8CI51 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Pdlim5Q8CI51 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Pdlim5Q8CI51 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Pdlim5Q8CI51 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
Pdlim5Q8CI51 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Pdlim5Q8CI51 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
Pdlim5Q8CI51 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Pdlim5Q8CI51 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC23.43■■□□□ 1.34
Pdlim5Q8CI51 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Pdlim5Q8CI51 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Pdlim5Q8CI51 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
Pdlim5Q8CI51 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
Pdlim5Q8CI51 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
Pdlim5Q8CI51 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC23.39■■□□□ 1.34
Retrieved 100 of 76,532 protein–RNA pairs in 10.8 ms