Protein–RNA interactions for Protein: Q8CGF5

Tmem56, Transmembrane protein 56, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem56Q8CGF5 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC22.38■■□□□ 1.17
Tmem56Q8CGF5 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Tmem56Q8CGF5 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
Tmem56Q8CGF5 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Tmem56Q8CGF5 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Tmem56Q8CGF5 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Tmem56Q8CGF5 Gm2415-204ENSMUST00000190235 2004 ntBASIC22.32■■□□□ 1.16
Tmem56Q8CGF5 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
Tmem56Q8CGF5 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Tmem56Q8CGF5 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Tmem56Q8CGF5 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Tmem56Q8CGF5 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
Tmem56Q8CGF5 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Tmem56Q8CGF5 Gm6658-202ENSMUST00000209493 1885 ntBASIC22.22■■□□□ 1.15
Tmem56Q8CGF5 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Tmem56Q8CGF5 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Tmem56Q8CGF5 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Tmem56Q8CGF5 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Tmem56Q8CGF5 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Tmem56Q8CGF5 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Tmem56Q8CGF5 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Tmem56Q8CGF5 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Tmem56Q8CGF5 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Tmem56Q8CGF5 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
Tmem56Q8CGF5 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
Tmem56Q8CGF5 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Tmem56Q8CGF5 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Tmem56Q8CGF5 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Tmem56Q8CGF5 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC22.08■■□□□ 1.13
Tmem56Q8CGF5 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Tmem56Q8CGF5 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Tmem56Q8CGF5 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Tmem56Q8CGF5 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Tmem56Q8CGF5 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Tmem56Q8CGF5 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Tmem56Q8CGF5 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC22.04■■□□□ 1.12
Tmem56Q8CGF5 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Tmem56Q8CGF5 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Tmem56Q8CGF5 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Tmem56Q8CGF5 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Tmem56Q8CGF5 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
Tmem56Q8CGF5 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
Tmem56Q8CGF5 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC22.01■■□□□ 1.11
Tmem56Q8CGF5 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Tmem56Q8CGF5 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
Tmem56Q8CGF5 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Tmem56Q8CGF5 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC22■■□□□ 1.11
Tmem56Q8CGF5 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC22■■□□□ 1.11
Tmem56Q8CGF5 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Tmem56Q8CGF5 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Tmem56Q8CGF5 Peli2-204ENSMUST00000226513 1320 ntBASIC21.96■■□□□ 1.11
Tmem56Q8CGF5 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.11
Tmem56Q8CGF5 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
Tmem56Q8CGF5 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Tmem56Q8CGF5 Gm24804-201ENSMUST00000174982 85 ntBASIC21.94■■□□□ 1.1
Tmem56Q8CGF5 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Tmem56Q8CGF5 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Tmem56Q8CGF5 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Tmem56Q8CGF5 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
Tmem56Q8CGF5 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Tmem56Q8CGF5 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Tmem56Q8CGF5 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC21.88■■□□□ 1.09
Tmem56Q8CGF5 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Tmem56Q8CGF5 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Tmem56Q8CGF5 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Tmem56Q8CGF5 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Tmem56Q8CGF5 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Tmem56Q8CGF5 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
Tmem56Q8CGF5 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Tmem56Q8CGF5 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Tmem56Q8CGF5 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Tmem56Q8CGF5 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC21.8■■□□□ 1.08
Tmem56Q8CGF5 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
Tmem56Q8CGF5 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Tmem56Q8CGF5 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Tmem56Q8CGF5 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Tmem56Q8CGF5 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Tmem56Q8CGF5 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Tmem56Q8CGF5 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Tmem56Q8CGF5 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Tmem56Q8CGF5 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Tmem56Q8CGF5 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC21.76■■□□□ 1.07
Tmem56Q8CGF5 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Tmem56Q8CGF5 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Tmem56Q8CGF5 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
Tmem56Q8CGF5 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Tmem56Q8CGF5 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Tmem56Q8CGF5 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Tmem56Q8CGF5 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC21.72■■□□□ 1.07
Tmem56Q8CGF5 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC21.72■■□□□ 1.07
Tmem56Q8CGF5 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Tmem56Q8CGF5 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Tmem56Q8CGF5 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Tmem56Q8CGF5 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Tmem56Q8CGF5 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Tmem56Q8CGF5 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC21.69■■□□□ 1.06
Tmem56Q8CGF5 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Tmem56Q8CGF5 Gm16148-201ENSMUST00000119653 893 ntBASIC21.69■■□□□ 1.06
Tmem56Q8CGF5 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Tmem56Q8CGF5 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms