Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
Smc5Q8CG46 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
Smc5Q8CG46 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
Smc5Q8CG46 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.84
Smc5Q8CG46 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC32.74■■■□□ 2.83
Smc5Q8CG46 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
Smc5Q8CG46 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC32.71■■■□□ 2.83
Smc5Q8CG46 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC32.71■■■□□ 2.83
Smc5Q8CG46 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC32.69■■■□□ 2.82
Smc5Q8CG46 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC32.68■■■□□ 2.82
Smc5Q8CG46 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
Smc5Q8CG46 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
Smc5Q8CG46 AL845457.1-201ENSMUST00000197244 68 ntBASIC32.65■■■□□ 2.82
Smc5Q8CG46 Mipep-204ENSMUST00000225043 1548 ntBASIC32.63■■■□□ 2.81
Smc5Q8CG46 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC32.62■■■□□ 2.81
Smc5Q8CG46 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC32.62■■■□□ 2.81
Smc5Q8CG46 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC32.59■■■□□ 2.81
Smc5Q8CG46 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
Smc5Q8CG46 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
Smc5Q8CG46 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
Smc5Q8CG46 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC32.51■■■□□ 2.8
Smc5Q8CG46 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC32.5■■■□□ 2.79
Smc5Q8CG46 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
Smc5Q8CG46 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
Smc5Q8CG46 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
Smc5Q8CG46 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC32.46■■■□□ 2.79
Smc5Q8CG46 Gm6206-201ENSMUST00000133472 2199 ntBASIC32.46■■■□□ 2.79
Smc5Q8CG46 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC32.45■■■□□ 2.78
Smc5Q8CG46 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.78
Smc5Q8CG46 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
Smc5Q8CG46 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Smc5Q8CG46 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
Smc5Q8CG46 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
Smc5Q8CG46 Gm9905-201ENSMUST00000065740 1845 ntBASIC32.4■■■□□ 2.78
Smc5Q8CG46 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC32.38■■■□□ 2.77
Smc5Q8CG46 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
Smc5Q8CG46 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
Smc5Q8CG46 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC32.36■■■□□ 2.77
Smc5Q8CG46 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
Smc5Q8CG46 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Smc5Q8CG46 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
Smc5Q8CG46 Zxda-201ENSMUST00000117281 2621 ntBASIC32.32■■■□□ 2.76
Smc5Q8CG46 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC32.31■■■□□ 2.76
Smc5Q8CG46 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
Smc5Q8CG46 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC32.28■■■□□ 2.76
Smc5Q8CG46 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC32.23■■■□□ 2.75
Smc5Q8CG46 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
Smc5Q8CG46 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC32.22■■■□□ 2.75
Smc5Q8CG46 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC32.21■■■□□ 2.75
Smc5Q8CG46 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
Smc5Q8CG46 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC32.2■■■□□ 2.75
Smc5Q8CG46 Gm25262-201ENSMUST00000174934 133 ntBASIC32.2■■■□□ 2.75
Smc5Q8CG46 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC32.18■■■□□ 2.74
Smc5Q8CG46 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC32.16■■■□□ 2.74
Smc5Q8CG46 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
Smc5Q8CG46 Gm43445-201ENSMUST00000198564 2091 ntBASIC32.14■■■□□ 2.74
Smc5Q8CG46 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
Smc5Q8CG46 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
Smc5Q8CG46 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
Smc5Q8CG46 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
Smc5Q8CG46 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC32.08■■■□□ 2.73
Smc5Q8CG46 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
Smc5Q8CG46 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC32.08■■■□□ 2.73
Smc5Q8CG46 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC32.06■■■□□ 2.72
Smc5Q8CG46 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
Smc5Q8CG46 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
Smc5Q8CG46 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.72
Smc5Q8CG46 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC32■■■□□ 2.71
Smc5Q8CG46 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC31.98■■■□□ 2.71
Smc5Q8CG46 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
Smc5Q8CG46 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
Smc5Q8CG46 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
Smc5Q8CG46 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC31.94■■■□□ 2.7
Smc5Q8CG46 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC31.94■■■□□ 2.7
Smc5Q8CG46 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Smc5Q8CG46 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
Smc5Q8CG46 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Smc5Q8CG46 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
Smc5Q8CG46 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC31.89■■■□□ 2.7
Smc5Q8CG46 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
Smc5Q8CG46 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Smc5Q8CG46 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Smc5Q8CG46 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Smc5Q8CG46 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
Smc5Q8CG46 Gm17082-201ENSMUST00000166043 1091 ntBASIC31.84■■■□□ 2.69
Smc5Q8CG46 AC166822.3-201ENSMUST00000227394 661 ntBASIC31.84■■■□□ 2.69
Smc5Q8CG46 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Smc5Q8CG46 Gm6345-201ENSMUST00000180378 1691 ntBASIC31.81■■■□□ 2.68
Smc5Q8CG46 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
Smc5Q8CG46 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Smc5Q8CG46 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
Smc5Q8CG46 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC31.79■■■□□ 2.68
Smc5Q8CG46 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
Smc5Q8CG46 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Smc5Q8CG46 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Smc5Q8CG46 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC31.77■■■□□ 2.68
Smc5Q8CG46 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC31.77■■■□□ 2.68
Smc5Q8CG46 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC31.76■■■□□ 2.68
Smc5Q8CG46 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC31.76■■■□□ 2.67
Smc5Q8CG46 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms