Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Zfp131-207ENSMUST00000224946 1783 ntBASIC25.03■■□□□ 1.6
SynpoQ8CC35 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
SynpoQ8CC35 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
SynpoQ8CC35 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC24.99■■□□□ 1.59
SynpoQ8CC35 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
SynpoQ8CC35 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
SynpoQ8CC35 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
SynpoQ8CC35 Zfp131-205ENSMUST00000223812 663 ntBASIC24.89■■□□□ 1.58
SynpoQ8CC35 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
SynpoQ8CC35 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
SynpoQ8CC35 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
SynpoQ8CC35 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC24.84■■□□□ 1.57
SynpoQ8CC35 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
SynpoQ8CC35 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
SynpoQ8CC35 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
SynpoQ8CC35 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
SynpoQ8CC35 Gm2415-204ENSMUST00000190235 2004 ntBASIC24.76■■□□□ 1.55
SynpoQ8CC35 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
SynpoQ8CC35 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC24.75■■□□□ 1.55
SynpoQ8CC35 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC24.75■■□□□ 1.55
SynpoQ8CC35 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC24.75■■□□□ 1.55
SynpoQ8CC35 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
SynpoQ8CC35 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
SynpoQ8CC35 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
SynpoQ8CC35 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
SynpoQ8CC35 Gm16148-201ENSMUST00000119653 893 ntBASIC24.73■■□□□ 1.55
SynpoQ8CC35 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
SynpoQ8CC35 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
SynpoQ8CC35 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
SynpoQ8CC35 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC24.69■■□□□ 1.54
SynpoQ8CC35 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
SynpoQ8CC35 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
SynpoQ8CC35 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
SynpoQ8CC35 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
SynpoQ8CC35 Mipep-204ENSMUST00000225043 1548 ntBASIC24.67■■□□□ 1.54
SynpoQ8CC35 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
SynpoQ8CC35 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC24.66■■□□□ 1.54
SynpoQ8CC35 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
SynpoQ8CC35 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
SynpoQ8CC35 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC24.65■■□□□ 1.54
SynpoQ8CC35 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC24.64■■□□□ 1.53
SynpoQ8CC35 Peli2-204ENSMUST00000226513 1320 ntBASIC24.63■■□□□ 1.53
SynpoQ8CC35 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SynpoQ8CC35 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
SynpoQ8CC35 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
SynpoQ8CC35 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
SynpoQ8CC35 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
SynpoQ8CC35 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
SynpoQ8CC35 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC24.57■■□□□ 1.52
SynpoQ8CC35 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
SynpoQ8CC35 Gm6658-202ENSMUST00000209493 1885 ntBASIC24.56■■□□□ 1.52
SynpoQ8CC35 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC24.56■■□□□ 1.52
SynpoQ8CC35 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
SynpoQ8CC35 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
SynpoQ8CC35 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
SynpoQ8CC35 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC24.51■■□□□ 1.51
SynpoQ8CC35 AC153504.1-201ENSMUST00000218379 2290 ntBASIC24.5■■□□□ 1.51
SynpoQ8CC35 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
SynpoQ8CC35 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
SynpoQ8CC35 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
SynpoQ8CC35 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SynpoQ8CC35 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
SynpoQ8CC35 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC24.46■■□□□ 1.51
SynpoQ8CC35 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
SynpoQ8CC35 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SynpoQ8CC35 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SynpoQ8CC35 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
SynpoQ8CC35 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
SynpoQ8CC35 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SynpoQ8CC35 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
SynpoQ8CC35 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
SynpoQ8CC35 Tdp2-203ENSMUST00000223804 1136 ntBASIC24.39■■□□□ 1.49
SynpoQ8CC35 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC24.38■■□□□ 1.49
SynpoQ8CC35 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
SynpoQ8CC35 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SynpoQ8CC35 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC24.37■■□□□ 1.49
SynpoQ8CC35 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
SynpoQ8CC35 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
SynpoQ8CC35 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SynpoQ8CC35 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC24.33■■□□□ 1.49
SynpoQ8CC35 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC24.32■■□□□ 1.48
SynpoQ8CC35 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC24.32■■□□□ 1.48
SynpoQ8CC35 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
SynpoQ8CC35 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC24.31■■□□□ 1.48
SynpoQ8CC35 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SynpoQ8CC35 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
SynpoQ8CC35 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SynpoQ8CC35 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SynpoQ8CC35 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
SynpoQ8CC35 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SynpoQ8CC35 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC24.24■■□□□ 1.47
SynpoQ8CC35 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SynpoQ8CC35 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
SynpoQ8CC35 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
SynpoQ8CC35 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
SynpoQ8CC35 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC24.23■■□□□ 1.47
SynpoQ8CC35 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
SynpoQ8CC35 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
SynpoQ8CC35 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
SynpoQ8CC35 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms